PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | AHYPO_019233-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
|
||||||||
Family | BES1 | ||||||||
Protein Properties | Length: 126aa MW: 14842.5 Da PI: 11.2494 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 115.3 | 9.4e-36 | 31 | 99 | 3 | 71 |
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrk 71 s r pt++Er nn RE+rRR i+ +iy GLR +Gnyklpk+aDnn lkALc eAGw+v++DGt ++k AHYPO_019233-RA 31 SLRFPTERERQNNVEREKRRREISRRIYNGLRLHGNYKLPKHADNNHLLKALCLEAGWIVQEDGTIFKK 99 6799***************************************************************98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 9.5E-32 | 33 | 99 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 126 aa Download sequence Send to blast |
MKRNKKTRGC IKTSRGPWVV QRSTKKGVVK SLRFPTERER QNNVEREKRR REISRRIYNG 60 LRLHGNYKLP KHADNNHLLK ALCLEAGWIV QEDGTIFKKV LYITTYLLLL LLYFITFVNF 120 PIIIS* |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 2e-16 | 53 | 99 | 392 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 2e-16 | 53 | 99 | 392 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 2e-16 | 53 | 99 | 392 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 2e-16 | 53 | 99 | 392 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011046810.1 | 3e-40 | PREDICTED: protein BRASSINAZOLE-RESISTANT 2-like | ||||
TrEMBL | A0A0K9QQR4 | 9e-48 | A0A0K9QQR4_SPIOL; Uncharacterized protein | ||||
STRING | XP_010677019.1 | 3e-51 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G36780.1 | 5e-19 | BES1/BZR1 homolog 2 |
Link Out ? help Back to Top | |
---|---|
Phytozome | AHYPO_019233-RA |