PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AHYPO_007548-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
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Family | NAC | ||||||||
Protein Properties | Length: 261aa MW: 30067.2 Da PI: 4.7398 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 57.3 | 5.5e-18 | 11 | 81 | 1 | 69 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka.eekew.yfFskrdkkya 69 +ppGfrFhPt+eel+++yLkkk++ ++++l +vi+++d++k+ePwd++ +++++ +e++w + r+k+y+ AHYPO_007548-RA 11 VPPGFRFHPTEEELLQYYLKKKISFQEIDL-DVIRDIDLNKLEPWDIQdNSTSTtSEDSWvICRVFRKKNYQ 81 69****************************.9***************9543333144466433333344443 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.18E-16 | 8 | 69 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 14.987 | 11 | 160 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.6E-8 | 12 | 73 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence Send to blast |
MNLSVNGQSK VPPGFRFHPT EEELLQYYLK KKISFQEIDL DVIRDIDLNK LEPWDIQDNS 60 TSTTSEDSWV ICRVFRKKNY QKTIDESPPN IPTPTTTTTT TTDQTQNQLL DLSSKKVLDQ 120 IFSCMGKATN DQDHQMINHD HPTTTCTGNT HYISTYTIPQ NIPNIHQKTL IIHDNHINTT 180 LLQPTNNHHH YNNNLPMLTS SSPTDQFHHD PIINMMSYED DDDDDYYDGK QRLSDWMTLD 240 RLIASQLNGQ DQDLCFSPDL * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 1e-29 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | AHYPO_007548-RA |