PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AHYPO_004291-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
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Family | WRKY | ||||||||
Protein Properties | Length: 221aa MW: 24623 Da PI: 6.1629 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.5 | 7.3e-30 | 14 | 72 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp+++++tY+ eHnh AHYPO_004291-RA 14 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRTDPNTLVVTYSYEHNHA 72 69*************************998****************************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 8.8E-31 | 9 | 74 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.18E-26 | 9 | 74 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.0E-35 | 13 | 73 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 31.892 | 14 | 74 | IPR003657 | WRKY domain |
Pfam | PF03106 | 8.6E-26 | 15 | 71 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence Send to blast |
MEGSRFKGDC TPPSDSWAWR KYGQKPIKGS PYPRGYYRCS SSKGCPARKQ VERSRTDPNT 60 LVVTYSYEHN HAWPISRNNH HNRHTTTTTT TIPTTLTSSS PSTVVGPTID DHPKPDENTT 120 TTQCSSSSDQ SILFPQSDHH DGMIPPTDHD LTWLSSDNHI LENNSFFTSF TDLDYMAKIF 180 PMREEDESLF ADLGELPECS VVFRKAANVV AGETWCGTTG * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 6e-19 | 15 | 74 | 18 | 79 | Disease resistance protein RRS1 |
5w3x_D | 6e-19 | 15 | 74 | 18 | 79 | Disease resistance protein RRS1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021750470.1 | 2e-96 | probable WRKY transcription factor 65 | ||||
TrEMBL | A0A0K9RVF9 | 1e-89 | A0A0K9RVF9_SPIOL; Uncharacterized protein | ||||
STRING | XP_010686240.1 | 7e-89 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29280.1 | 1e-43 | WRKY DNA-binding protein 65 |
Link Out ? help Back to Top | |
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Phytozome | AHYPO_004291-RA |