 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
AHYPO_002586-RA |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
|
| Family |
bHLH |
| Protein Properties |
Length: 350aa MW: 39180.8 Da PI: 5.9299 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| AHYPO_002586-RA | genome | BYU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 16.3 | 1.8e-05 | 150 | 169 | 1 | 20 |
CHHHHHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsaf 20
+r++h ++Er+RR+++N+ +
AHYPO_002586-RA 150 QRMTHIAVERNRRKQMNEYL 169
79***************987 PP
|
| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| CDD | cd00083 | 7.28E-8 | 148 | 192 | No hit | No description |
| SuperFamily | SSF47459 | 9.03E-10 | 149 | 209 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
| Sequence ? help Back to Top |
| Protein Sequence Length: 350 aa
Download sequence Send
to blast |
MALDAVIFSQ DPLITPSFNY CPSNFGMSTY NEFANYYYYP SLLDDNNNNN NLKVPFNDGL 60
LEVNNNNNNV IPCNLFTPSE LMNIEWNQQS EHQQYVPLNL SSSPEENLYL SGQAQPPPRN 120
NLGAQTKTGV GPRRKSRRRN SKNKEEVEHQ RMTHIAVERN RRKQMNEYLA GDQASIVGGA 180
INYVKELEQL LQSMETRKIS KKDNQQPPPP PSPSEGDGGG EKRNAWPEIF NDFFSFPQYS 240
TRSKSEGNSV MNSCNRSVGD IEVTMVESHA NVKIMAKKQP KQLVKLIAGF QGLRLNVLHL 300
NVTTIDSFVL YSLSLKVEEG CQLSSVDDIA GAANHILGQI QEEAGDHLL*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 150 | 161 | RMTHIAVERNRR |
