PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_000803-RA
Organism
Amaranthus hypochondriacus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family bZIP
Protein Properties Length: 163aa    MW: 18126.3 Da    PI: 9.0378
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_000803-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.86.6e-153593563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                     k+ rr+++NRe+ArrsRqRK++ ++eL + v +L+ eN++  k+++e +   +k ++++
  AHYPO_000803-RA 35 KKRRRMESNRESARRSRQRKQQHLDELLKQVSALTRENEEIGKKIDEVSGILSKFEAQN 93
                     899******************************************99887777666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.4E-173195IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.9093396IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.0E-143390No hitNo description
SuperFamilySSF579591.94E-123586No hitNo description
PfamPF001701.8E-123593IPR004827Basic-leucine zipper domain
CDDcd147028.66E-193683No hitNo description
PROSITE patternPS0003603853IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    Send to blast
MSHSNDTYDV KNVVVRPTKS SGTSDGSSDF VMDEKKRRRM ESNRESARRS RQRKQQHLDE  60
LLKQVSALTR ENEEIGKKID EVSGILSKFE AQNKVLNSAK DGLAAKLDSL ESLIEVGKIV  120
GGSSNGSNYD DVNSDPMMKP WQLPCPPSMP IYASTSLDRF KF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14753RRSRQRK
24754RRSRQRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010671685.11e-54PREDICTED: bZIP transcription factor 53
STRINGXP_010671685.16e-54(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.15e-25basic region/leucine zipper motif 53