PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.Z7FDS
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HD-ZIP
Protein Properties Length: 284aa    MW: 32686 Da    PI: 5.2157
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.Z7FDSgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.22.4e-1775127456
                  -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                  + ++ ++q+e Le+ Fe ++++  e++ +LAk++gL  rqV +WFqNrRa+ k
  Aradu.Z7FDS  75 KKRLRSDQVEFLEKSFEVDNKLEPERKFQLAKQIGLHPRQVAIWFQNRRARFK 127
                  456889*********************************************98 PP
2HD-ZIP_I/II117.57.3e-3874165293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  kk+rl ++qv++LE+sFe ++kLeperK +la+++gl+prqva+WFqnrRAR+ktk++Ekd++aLk+++d+l+++ + L +++ +L++++++
  Aradu.Z7FDS  74 KKKRLRSDQVEFLEKSFEVDNKLEPERKFQLAKQIGLHPRQVAIWFQNRRARFKTKRIEKDFAALKQSFDTLQQQYDLLLRDNLNLQQQVDS 165
                  9**************************************************************************************99975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.14E-1864129IPR009057Homeodomain-like
PROSITE profilePS5007116.66569129IPR001356Homeobox domain
SMARTSM003891.9E-1571133IPR001356Homeobox domain
CDDcd000866.07E-1574130No hitNo description
PfamPF000466.1E-1574127IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.1E-1780128IPR009057Homeodomain-like
PRINTSPR000313.7E-5100109IPR000047Helix-turn-helix motif
PROSITE patternPS000270104127IPR017970Homeobox, conserved site
PRINTSPR000313.7E-5109125IPR000047Helix-turn-helix motif
PfamPF021831.2E-10129169IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    Send to blast
MEEAINQLYA PHLRQHNQTL FHPSQPSFQG SKSVVNFESV SVSGSGPLLL EDNTFGVDDE  60
DYDCCLQQQG SSYKKKRLRS DQVEFLEKSF EVDNKLEPER KFQLAKQIGL HPRQVAIWFQ  120
NRRARFKTKR IEKDFAALKQ SFDTLQQQYD LLLRDNLNLQ QQVDSLKKRV IPREEGLDDG  180
VNSKHIIEEV GVNMISKVED ATTTTNSSKS DVLDSDSPNY TDGNHSSSPH HDFSSHHQQH  240
NNNKNLLKTL SFLPKIEDDD DHDNTCNFGL PVVDEDQAFD FWSY
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.Z7FDS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015956983.10.0homeobox-leucine zipper protein HAT5
TrEMBLA0A444ZUR90.0A0A444ZUR9_ARAHY; Uncharacterized protein
STRINGAES965364e-74(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3053122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.19e-31homeobox 1