PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.YZ2FS
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Dof
Protein Properties Length: 323aa    MW: 35268.7 Da    PI: 7.5944
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.YZ2FSgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1282.7e-403393262
       zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                 +e+alkcprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+ss
  Aradu.YZ2FS 33 PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSS 93
                 7899******************************************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027014.0E-343591IPR003851Zinc finger, Dof-type
ProDomPD0074781.0E-273691IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.6463791IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103975IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MDPSSGQHHQ ELENMIGCST KSQQQERKPR PQPEQALKCP RCDSTNTKFC YYNNYSLSQP  60
RYFCKSCRRY WTKGGTLRNV PVGGGCRKNK RSSNSSSSST TSSSSNSPAP SSRRPQDHHG  120
FISPNNPLIT AFPHLAYDHH PSSSPTSDLT LALARLQKQT MPFDDHDLSI LGNPTSSLCD  180
ILGNQGLNTH NTSSTGFLEA LRTGFQGNNS NNNALHHQNL YYSYGNGDMG EVVDNGAVNA  240
GDMLLPNHYD SEMSNAATQA VSVSTMKQEL CSEATKVLGG GAFPWHNSSN GDTNMGEFDS  300
ARATWNAGFT SSNWHGLLHS PLM
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.YZ2FS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015935689.10.0dof zinc finger protein DOF3.2 isoform X1
TrEMBLA0A445BVT50.0A0A445BVT5_ARAHY; Uncharacterized protein
STRINGGLYMA12G07710.11e-115(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50263051
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28510.16e-41Dof family protein