PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.W5JRX

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 205aa MW: 23328.4 Da PI: 7.5255

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.W5JRX	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	64.9	2.2e-20	89	178	1	89
FAR1 1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fY +YAk+vGF +r+++++ k+++ +++ + Cs+eg+re++ k+ + r + t gCka++ v +++ +++w+v+klel+H+H++ Aradu.W5JRX 89 EFYTNYAKKVGFVTRIRNTNFDktrKDSKIPVNQSLHCSREGYRESRVKA---ATRVKRITTAGCKARMYVMLDRqKDNWMVSKLELKHTHPC 178 6***********999887664445555668999********999...888889999******9998*************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.7E-18	89	179	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 205 aa Download sequence Send to blast
MLMEQAICEG TSYGIAYDDS DQYNSCDVNV PSLSEDDTHV DKGKESGSVI EVVDDAMAVI 60 HELPDHTGVP LDEIPYVGLR FVSLQQAQEF YTNYAKKVGF VTRIRNTNFD KTRKDSKIPV 120 NQSLHCSREG YRESRVKAAT RVKRITTAGC KARMYVMLDR QKDNWMVSKL ELKHTHPCSA 180 KQAVHYTEYR ELTMHAKSVH KCNCS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.W5JRX

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015936162.1	1e-144	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445E201	1e-137	A0A445E201_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF30369	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	2e-18	FAR1 family protein