PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.UR38U
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 88aa    MW: 10097.2 Da    PI: 4.5113
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.UR38UgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR127.88.4e-095188140
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegk 40
                 kfY++YAk  GFs+r+++++++  +++i+++  +Cs+egk
  Aradu.UR38U 51 KFYRNYAKASGFSTRVRSTNRK--ENKIKNQLITCSREGK 88
                 6****************98887..6669**********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031015.0E-65188IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
MDDSTSDCQL NQGEMDYEFE SNEVPEPLSV VDDQFVPKVG MTFTTLEDAE KFYRNYAKAS  60
GFSTRVRSTN RKENKIKNQL ITCSREGK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.UR38U
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371783e-68HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020981425.14e-50protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YPX92e-54A0A444YPX9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.11e-08FAR1-related sequence 10