PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.TKK2L
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 190aa    MW: 21389.9 Da    PI: 4.6967
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.TKK2LgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.33.5e-1018101998
                  HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
           B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                   +l+ g+l l kkf +e+g + +++  + l+ ++g  W++    + ++g + +++GWkeF++   L+ g  + F +++  + +  v++f+
  Aradu.TKK2L  18 KSLEDGNLKLTKKFSKEYGDSVPNP--VYLKPPDGTAWKIDW--SLYDGLIQFENGWKEFASYYSLDNGHLLQFAYNE--TSNIEVQIFD 101
                  4456677***********8886676..***************..88998999***********************965..4445888886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019361.45E-155101IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.108.0E-156101IPR015300DNA-binding pseudobarrel domain
CDDcd100171.31E-810101No hitNo description
PROSITE profilePS5086310.34810103IPR003340B3 DNA binding domain
SMARTSM010192.4E-811103IPR003340B3 DNA binding domain
PfamPF023622.5E-713101IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MASSISSDIR FFKIGLKKSL EDGNLKLTKK FSKEYGDSVP NPVYLKPPDG TAWKIDWSLY  60
DGLIQFENGW KEFASYYSLD NGHLLQFAYN ETSNIEVQIF DIIDGSEINY PSLDHIGDDN  120
SIEILNELPP RGWPRKKLKA AAEVSSPSTS KILRSSVKTG DVEKGPDKQN WMQCCNNEEA  180
SQSEETGLKN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.TKK2L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015946722.11e-138B3 domain-containing protein At3g18960
TrEMBLA0A445B1P91e-113A0A445B1P9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9834369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01580.15e-15B3 family protein