PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.SXL5T
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WOX
Protein Properties Length: 446aa    MW: 50716.9 Da    PI: 7.5117
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.SXL5TgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox68.77.1e-22126185357
                  --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                  +R+++t+eql++Leel+++ +r+psae++++++++l    +++ ++V++WFqN++a+e++
  Aradu.SXL5T 126 SRWNPTPEQLRALEELYRRgTRTPSAEQIQHITAQLrrfgKIEGKNVFYWFQNHKARERQ 185
                  7*****************99**************************************97 PP
2Wus_type_Homeobox113.79.5e-37125187365
  Wus_type_Homeobox   3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L+++Gkie+kNVfyWFQN+kaRerqk+
        Aradu.SXL5T 125 SSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKR 187
                        79***********************************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003899.3E-5123190IPR001356Homeobox domain
PfamPF000461.5E-19126185IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.606.1E-9126185IPR009057Homeodomain-like
SuperFamilySSF466891.33E-12126191IPR009057Homeodomain-like
CDDcd000862.16E-6127187No hitNo description
PROSITE profilePS5007111.224131186IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048513Biological Processanimal organ development
GO:0099402Biological Processplant organ development
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
MWMVGYNEGG GGDHHHHQLN MVVDHHHHHH HHHPFGASGR KLRPLMPRPM TSPNNSTTTT  60
TTTTNNNNNN NNNPCLSLVH HQGNDFFSQY HNHLCKKLKV LLLGEQNKRE NGNNNNNGSA  120
PVVVSSRWNP TPEQLRALEE LYRRGTRTPS AEQIQHITAQ LRRFGKIEGK NVFYWFQNHK  180
ARERQKRRRQ MESSDTNNNN HPLQNNNHHR DFDSSSEKKE LAASRTMVEV EQTKNWASST  240
NCTTLAEESV SMEREGGAGK AGVAECRADG WVQFEEGELQ QRRNFMERNA TWHMMMHHHS  300
PCAAAAPPAP APPVTHLINA PPPPPTSSSS LPLLLPLQPS KLINNNNNNL SFFISSENNY  360
NNTTLLHLTT THSNEEDDDV LVDNSIINIH HHHHQNENQT LQLFPLRSGD DLHHHINGKG  420
TEISASNDAI TPNHHHFFEF LPLKNN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.SXL5T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020958447.10.0WUSCHEL-related homeobox 1 isoform X3
RefseqXP_025655689.10.0WUSCHEL-related homeobox 1-like isoform X3
TrEMBLA0A444Z1350.0A0A444Z135_ARAHY; Uncharacterized protein
STRINGGLYMA05G33850.21e-132(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28923471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18010.15e-50WUSCHEL related homeobox 1