PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.SC6RY
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family GATA
Protein Properties Length: 371aa    MW: 40280.5 Da    PI: 7.2514
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.SC6RYgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.34.5e-18253287135
         GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C +Cg+ kTp+WR gp g+ktLCnaCG+++++ +l
  Aradu.SC6RY 253 CLHCGADKTPQWRTGPMGPKTLCNACGVRFKSGRL 287
                  99*****************************9885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004014.5E-16247297IPR000679Zinc finger, GATA-type
PROSITE profilePS5011412.044247283IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.9E-14250310No hitNo description
Gene3DG3DSA:3.30.50.103.1E-14251285IPR013088Zinc finger, NHR/GATA-type
CDDcd002021.22E-13252299No hitNo description
PfamPF003209.3E-16253287IPR000679Zinc finger, GATA-type
PROSITE patternPS003440253278IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MEVPEYFVGG YYGAGGDQFS TEKRHGVGGG DQKHGGYGGG GEPFAIDDLL DFSNADAIMS  60
DGYSSTDSSN VTAVDSCNSS VSGGDNHFPA GIVPRAFSSG DPQFSGGDLC VPYDDMAELE  120
WLSNFVEDSF STEEDLKTLQ LLSGGGATAI NGRKPQTPES SSSSENALHP PFDTARNAPF  180
LLHQETPLPG KARSKRSRAA PGDWSTRLLH LSTPPPPKLQ TSAAEHKPPT PKVAAPTTTK  240
RREANAECLG RKCLHCGADK TPQWRTGPMG PKTLCNACGV RFKSGRLVPE YRPAASPTFV  300
STKHSNSHRK VLELRRQKDL QRQHQQQQQL MSQTSIFGVS NGGDEFLIHH HHHHPHHHQQ  360
HHCGPDFRHV I
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.SC6RY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015938479.10.0GATA transcription factor 9
TrEMBLA0A445BPZ50.0A0A445BPZ5_ARAHY; GATA transcription factor
STRINGXP_007135644.11e-175(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13643395
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.12e-64GATA transcription factor 9