PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.N2VZY

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 522aa MW: 59621.9 Da PI: 5.9095

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.N2VZY	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.4	8.6e-17	81	171	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY++YA+ GF r +++ + ng+ +r+ C++eg+r+++ + +++++ +++ tr+ C+ak++ + + kw+vtk+e+ Hn +l Aradu.N2VZY 81 DFYRNYARVHGFVARLDEKGQD-FNGNLNMRQIICNREGTRRKKYLEmENRKKDHKPITRVMCQAKIRFHYDLiLPKWRVTKFEETHNDDLI 171 6***********99987776.9999***********999885677778999***********999***********9886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	4.9E-14	81	171	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence Send to blast
MNIDDNKNLE ESIECDELCF GYDSSSDKEE EDLINNEGKF SESMEVSNCS YKIQEVEKKL 60 NELSYDDMWG IKFDTVDQCC DFYRNYARVH GFVARLDEKG QDFNGNLNMR QIICNREGTR 120 RKKYLEMENR KKDHKPITRV MCQAKIRFHY DLILPKWRVT KFEETHNDDL IPPKYIQFVP 180 AYRTMTDADK AQADSLHFMY RTNELLSDFK SLFTIPVLTT CLQDIEKQAA NIFTRSMFKE 240 VRCEIEEAGK LNVVTHSVSN NEVKSPIDKS TKTIVKKTNV NAGRKKELSR KGSVGKKLYS 300 PKSSPTEISK SLLGKGSPTG YSINHNTLPN LSLRRNDSGI EAPFWLPVVF RPPAGMELDE 360 TDIQVATYIF GSDKEDEINR HEILAKGSKF DANRDSFFNL IPKGWIDEDA MYIEEMLQDD 420 SFYDLETTVR PKVFRFADPK HIETGEQKIG SNDRGIWVAT WMKDYAKNDN YSVKGCGDGE 480 RRYAGGSEAA NTGVTEAQDV RDGSDTAVGG GKRGRCNCGH RG

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence Send to blast

MNIDDNKNLE ESIECDELCF GYDSSSDKEE EDLINNEGKF SESMEVSNCS YKIQEVEKKL  60
NELSYDDMWG IKFDTVDQCC DFYRNYARVH GFVARLDEKG QDFNGNLNMR QIICNREGTR  120
RKKYLEMENR KKDHKPITRV MCQAKIRFHY DLILPKWRVT KFEETHNDDL IPPKYIQFVP  180
AYRTMTDADK AQADSLHFMY RTNELLSDFK SLFTIPVLTT CLQDIEKQAA NIFTRSMFKE  240
VRCEIEEAGK LNVVTHSVSN NEVKSPIDKS TKTIVKKTNV NAGRKKELSR KGSVGKKLYS  300
PKSSPTEISK SLLGKGSPTG YSINHNTLPN LSLRRNDSGI EAPFWLPVVF RPPAGMELDE  360
TDIQVATYIF GSDKEDEINR HEILAKGSKF DANRDSFFNL IPKGWIDEDA MYIEEMLQDD  420
SFYDLETTVR PKVFRFADPK HIETGEQKIG SNDRGIWVAT WMKDYAKNDN YSVKGCGDGE  480
RRYAGGSEAA NTGVTEAQDV RDGSDTAVGG GKRGRCNCGH RG

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.N2VZY

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF23548	2	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	8e-15	FAR1-related sequence 11