PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.M5YJC | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | MYB_related | ||||||||
Protein Properties | Length: 366aa MW: 39986.4 Da PI: 8.3976 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26 | 2.1e-08 | 252 | 291 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg..kgRtlkqc 40 +W++e d ll d+v+++G g+W+tIa+ + +Rt+kq+ Aradu.M5YJC 252 AWSEEKDNLLRDVVQRFGEGHWATIAKGGNvpVKRTAKQI 291 7**************************9888899***998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.225 | 245 | 301 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.1E-8 | 246 | 294 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 3.88E-7 | 248 | 294 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 8.6E-7 | 252 | 291 | IPR001005 | SANT/Myb domain |
CDD | cd11660 | 3.73E-7 | 253 | 294 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence Send to blast |
MKPMLLPGGC FALVEGRAGK PCMWIQLACQ IGRGIRMLPC PCGGQGNVVM VRPSCAPKLP 60 CCACWPCQFV CHAPRNAALP STRAEQRKLS LFLGEVPSSK LAGWLLLPLF SWFSWCQGSA 120 WSLASSRSCV QSLEESETAL EEGRAEIFLL SFLGLELCSA LKEGRAVMII SLSESTPSSS 180 TIEAPLTIHA SVCNSSKTSN KGIQSSSLMQ RTEIIFLVTI KRQTLPAVSL TDNIKIKGLD 240 GSNMASKKRK IAWSEEKDNL LRDVVQRFGE GHWATIAKGG NVPVKRTAKQ IDQKKYVIRG 300 SNGCKVGDDN NSLVLMWEDG FCQGRSASLV EDMDGGGEDL VRKAFSKMSI QLYNYGEGWL 360 PPEWTD |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.M5YJC |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3122 | 32 | 56 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09710.2 | 2e-07 | MYB_related family protein |