PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.KB6LK | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bZIP | ||||||||
Protein Properties | Length: 308aa MW: 34217.4 Da PI: 7.5966 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 54.2 | 3.2e-17 | 223 | 283 | 3 | 63 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+++er++ +NRe+A+rsR+RK++e+eeL+ +++L+ eN++L l +l++e+ l +e+ Aradu.KB6LK 223 EIRKERKRLSNRESAKRSRLRKQKECEELRGNMDNLKDENSSLTHMLIRLSEECMDLSNEN 283 789***************************************************9999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.3E-12 | 220 | 281 | No hit | No description |
SMART | SM00338 | 2.0E-12 | 221 | 285 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.783 | 223 | 286 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.8E-14 | 223 | 283 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.13E-10 | 224 | 280 | No hit | No description |
CDD | cd14702 | 3.30E-17 | 226 | 277 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 228 | 243 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence Send to blast |
MGTEESDKLG ASFKFMEPKD ETVNRSLQPH WTSSMQAYHN AGSTPIPFLN PHYGPYFGQF 60 IWPKQSTITQ YNFLHESMRI SNNSAIAGVI PNQQQQPSAV PVVGPAGDAA SVFSEKIQRM 120 FGANNEDSIK KCNGSLQSKS SITKEAKEIK IICSTPNHDM SGASGGKEPS DEGHDSKHDF 180 PSPKQKCNVV SENVNSRKQH KDTMAGLNAS ASVAKLAKLE NDEIRKERKR LSNRESAKRS 240 RLRKQKECEE LRGNMDNLKD ENSSLTHMLI RLSEECMDLS NENDSIQAEL VKMYGAESIA 300 DLLPMKPS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.KB6LK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020989828.1 | 0.0 | G-box-binding factor 1-like isoform X2 | ||||
TrEMBL | A0A445B0R0 | 0.0 | A0A445B0R0_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14940 | 10 | 13 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36730.2 | 2e-22 | G-box binding factor 1 |