PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.K4U8Y | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WOX | ||||||||
Protein Properties | Length: 251aa MW: 26713.4 Da PI: 5.8472 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 17.5 | 6.8e-06 | 36 | 70 | 2 | 35 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAk 35 r+R+t+++eq+ +Le+ F++ +p ++e ++ k Aradu.K4U8Y 36 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRK 70 89*****************9899999999888766 PP | |||||||
2 | Wus_type_Homeobox | 63.5 | 4.3e-21 | 35 | 82 | 2 | 49 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkN 49 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+N Aradu.K4U8Y 35 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDAN 82 589*******************************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MEEQGQQHHQ DPNRSHSHGA GGSSSSSEKQ SSEPVRSRWT PKPEQILILE SIFNSGMVNP 60 PKDETVRIRK LLEKFGAVGD ANDHPGQPAL SVGSSLGFGG SSSFGDSSSC SFHLPPPPTG 120 AVGGSSSSSS SFGGEQEAMD NFFSGVPPPH HHTPQMGFQE FDHTSSLFPH VPPNFTYNSG 180 FGGNNVSGFI TVFINGIATE VPRGLIDIKT LFGEDAILVH SSGVPLPTNE FGFLIQTLQH 240 GESYFLVPKP T |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor which may be involved in developmental processes. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.K4U8Y |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020980607.1 | 1e-127 | WUSCHEL-related homeobox 11-like isoform X1 | ||||
Swissprot | Q6X7J3 | 9e-59 | WOX11_ARATH; WUSCHEL-related homeobox 11 | ||||
TrEMBL | A0A445CS56 | 1e-122 | A0A445CS56_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA19G29660.2 | 2e-71 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5898 | 31 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03660.1 | 1e-26 | WUSCHEL related homeobox 11 |
Publications ? help Back to Top | |||
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