PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.FG89G
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bZIP
Protein Properties Length: 436aa    MW: 48731 Da    PI: 10.0989
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.FG89GgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.31.9e-09110149342
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 
                  + k  rr+++N eAA++sR+RKka++++Le+    L +  
  Aradu.FG89G 110 DQKTLRRLAQNCEAAKKSRLRKKAYVQQLENSRVRLAQLE 149
                  56889*************************8544444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.5E-7104153No hitNo description
SMARTSM003380.0025108186IPR004827Basic-leucine zipper domain
PfamPF001705.1E-7111152IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.56E-5113160No hitNo description
PROSITE patternPS000360115130IPR004827Basic-leucine zipper domain
SuperFamilySSF509781.2E-23187363IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.109.6E-24216363IPR015943WD40/YVTN repeat-like-containing domain
PROSITE profilePS5029411.603230363IPR017986WD40-repeat-containing domain
SMARTSM003200.013246285IPR001680WD40 repeat
SMARTSM0032032289323IPR001680WD40 repeat
SMARTSM0032022326366IPR001680WD40 repeat
PfamPF004000.16335363IPR001680WD40 repeat
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MRLLLSSSHE LSRSCSCLTS SLRRHSRAAS SLLAGGLSSS LLVAVSLGLR LLLIPIPNPS  60
IRTEFLNSKR YDSNTTPKAT TCLIDSDLAV ALGKLVVVDS NDQTKLKHED QKTLRRLAQN  120
CEAAKKSRLR KKAYVQQLEN SRVRLAQLEQ ELQSSNFTVH RRPRMGGHRF IGMRTQHQKL  180
TRKCDIRGNI FLWAFKGVMD QNPSPFGHIL LDQSFSPSCI MHRDTYLNKV LVGSEQGPMQ  240
LWTISTKKKI FEFKGWDSPI TYCVSSPALD VVAVGCADGS IHVHNIRYDK ELVTFTHSTR  300
GSVTALSFCT ASGGSSGVIS VWNLEKKRLQ SVVREAHDSV ITSLHFFANE PVLMSSSADN  360
SIKNNLHELW TLLNFLLPEI FSSVETFDEW FQISGKMVLL DNKAMEQVSK NQALVDAIGE  420
PIVKAQDRAH RIGQKK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5oql_O3e-12225363194362Putative U3 snoRNP protein
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.FG89G
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025623936.11e-169WD repeat-containing protein 36 isoform X1
RefseqXP_025623937.11e-169WD repeat-containing protein 36 isoform X1
RefseqXP_025623938.11e-169WD repeat-containing protein 36 isoform X1
RefseqXP_025623939.11e-169WD repeat-containing protein 36 isoform X1
RefseqXP_025623940.11e-169WD repeat-containing protein 36 isoform X1
RefseqXP_029145603.11e-169WD repeat-containing protein 36 isoform X1
TrEMBLA0A445B3M51e-167A0A445B3M5_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.12e-20bZIP family protein