PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.ET1ZZ

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 156aa MW: 17677 Da PI: 8.894

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.ET1ZZ	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.6	4.1e-18	53	137	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfY++YAk +GFs+r+++ +++ +ei+++ +Cs+egk +++ + +++ +++ +C a++ ++ k g w ++k++l+H+H++ Aradu.ET1ZZ 53 KFYRNYAKAAGFSTRVRSINRK--GNEIKNQLITCSREGKWKSKISP---TEKANPTAGLNCPARIYIHTLKdVGAWIISKVVLDHSHPC 137 6**************99887..8889*********999877...889999********998879************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.7E-15	53	137	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence Send to blast
KIIDDSTSDC QLNQGEVDYE FESNEVPEPL SVVDDQFVPK VGMTFTTPED AGKFYRNYAK 60 AAGFSTRVRS INRKGNEIKN QLITCSREGK WKSKISPTEK ANPTAGLNCP ARIYIHTLKD 120 VGAWIISKVV LDHSHPCKYH KEEENKRFKR GKSNVL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.ET1ZZ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	1e-142	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020992539.1	5e-88	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444YPX9	7e-92	A0A444YPX9_ARAHY; Uncharacterized protein
TrEMBL	A0A444YSY6	4e-91	A0A444YSY6_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	7e-12	FAR1 family protein