PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.E4LG1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | MYB_related | ||||||||
Protein Properties | Length: 308aa MW: 35546.4 Da PI: 4.3666 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.3 | 8.6e-09 | 4 | 28 | 23 | 48 |
-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48 +W+ Ia +++ gRt++++k++w+++l Aradu.E4LG1 4 RWSVIAGHLP-GRTDNEIKNYWNSHL 28 5*********.************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 15.997 | 1 | 32 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.09E-7 | 3 | 33 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 8.63E-6 | 4 | 28 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 1.7E-12 | 4 | 29 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 1.4E-6 | 4 | 28 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence Send to blast |
MKLRWSVIAG HLPGRTDNEI KNYWNSHLRR KIYCFMRSLN ESLPPIDMAA LNEAASKRRA 60 APRRSSTIQE TNKTSLPKRE AITTSSQNCC NILGDHDHDD DDGKGISMMD AYFQMELGNN 120 NNPSSFMNNN NNGDFDEGLL GAYEWPDEEI MRLTQMFENG VLVNNNNNNN NIALKEEPNG 180 NYYYDDDECG QMIDMDMDLD MDVIGATRTT SEEEEEESKN HKNNNIAASI SEHNYWYNNN 240 NNDNSCSSSS VGDYHQWHDW DLAHQSNNNN NNHHQWDLST EDDQMLMMNS LWGTTTNEVN 300 NTTFHHYY |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.E4LG1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015959589.1 | 0.0 | transcription factor MYB111-like | ||||
Refseq | XP_025692112.1 | 0.0 | transcription factor MYB111 | ||||
TrEMBL | A0A444WPW8 | 0.0 | A0A444WPW8_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF31 | 34 | 817 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 1e-13 | myb domain protein 12 |