PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.C7X3Q | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | FAR1 | ||||||||
Protein Properties | Length: 210aa MW: 23842 Da PI: 5.0091 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 52.4 | 1.7e-16 | 116 | 205 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 Y+e+A + GF vrk + ++r+ C +g+r++++ + e+ r++r e+rt+Ckaklk+ + d++w+v k+ eH+H++ap Aradu.C7X3Q 116 AYKEFAWTRGFGVRKGDVGWV--DSVLVRRDIFCHHQGTRSDKHYDrPERVREERLESRTDCKAKLKIYYDVhDNVWRVRKIIDEHSHDMAP 205 59**************99988..8999**************9998856778899***************9999***************9975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 8.9E-15 | 116 | 205 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence Send to blast |
MMNNNSTIPS CHFESDACVI NQKSPIGFNS GQMDFDLYSS DNDEESSEMS LGVYGSSGSS 60 DDDDSTSLFG IGTSHSESNK ESHRSQGEVH GKVPVLLTAE DFLHTVFTSE EEAYNAYKEF 120 AWTRGFGVRK GDVGWVDSVL VRRDIFCHHQ GTRSDKHYDR PERVREERLE SRTDCKAKLK 180 IYYDVHDNVW RVRKIIDEHS HDMAPAAFCN |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.C7X3Q |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020989621.1 | 1e-129 | protein FAR1-RELATED SEQUENCE 5-like | ||||
TrEMBL | A0A445CC21 | 1e-103 | A0A445CC21_ARAHY; Uncharacterized protein | ||||
TrEMBL | A0A445D673 | 1e-110 | A0A445D673_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF17191 | 2 | 6 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10240.1 | 8e-09 | FAR1-related sequence 11 |