PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.5N1W2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | G2-like | ||||||||
Protein Properties | Length: 123aa MW: 13736.4 Da PI: 10.8358 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 36 | 1.6e-11 | 2 | 27 | 2 | 27 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekA 27 prl+Wtp+LH +Fv++v++LGG+ek Aradu.5N1W2 2 PRLCWTPNLHLSFVHVVQRLGGQEKS 27 8**********************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.9E-8 | 1 | 28 | IPR009057 | Homeodomain-like |
SuperFamily | SSF53098 | 4.86E-7 | 37 | 108 | IPR012337 | Ribonuclease H-like domain |
Pfam | PF13456 | 6.4E-6 | 70 | 111 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence Send to blast |
MPRLCWTPNL HLSFVHVVQR LGGQEKSFES AKAISVGASK GVQRLGNQLL MVLQNTKIKL 60 HLRLREGVGI APCNAAEYRA MILGMRYALK KGFSFIRIQG DSKLVCMQFS CIQVTVAQQL 120 LHL |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.5N1W2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC235188 | 1e-37 | AC235188.1 Glycine max strain Williams 82 clone GM_WBb0010N12, complete sequence. | |||
GenBank | AC235309 | 1e-37 | AC235309.1 Glycine max strain Williams 82 clone GM_WBb0069M12, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A445B756 | 9e-76 | A0A445B756_ARAHY; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42660.1 | 8e-09 | G2-like family protein |