PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.2PP50

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 502aa MW: 56318.9 Da PI: 6.8362

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.2PP50	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.1	5.8e-18	79	169	1	91
FAR1 1 kfYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 ++Y++YA ++GF ++++++++ ++++ +++ C+k g+r ++k++ +r ++ t +gCka+ v+++k +g w+v+klel H+H+l+p Aradu.2PP50 79 NYYHRYAAKMGFVAKIRNTNYEkhSKDKIPINQSIHCNKDGHRISQKRA---PKRAKTITSVGCKARCYVRLDKsTGLWKVSKLELSHTHPLNP 169 69********8776665554237788889**********9988...899999***********99**************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	6.5E-15	79	169	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence Send to blast
MDLNTKPLAE LLEVDEAGFH LCNEVGHSES NNDIGDLRTT VDEGPVGENP REGMCFGADP 60 GNEDPREGMC FGTLLEARNY YHRYAAKMGF VAKIRNTNYE KHSKDKIPIN QSIHCNKDGH 120 RISQKRAPKR AKTITSVGCK ARCYVRLDKS TGLWKVSKLE LSHTHPLNPK PSAILENREL 180 FLHTKDLIQR NDEVDRQPNK TFQASTMDMD RKISNLNAIH QSLLTRWTAE SAREQGSSSA 240 TPSDVIIKDE TPFPVNNQTP SDVIIKDKSP ILVNIQNIPE EPSPSPLHSL PEKNRKKGED 300 TEAGCASEVV SDHDFGFVLK NTFDAGGFID QYLLNSSTVE VLENIPANEN ISRMQRMLLK 360 SAILCRDMER SFSDLQKLKE KLVAKEKEIA FLTAQNIELS SKTIELSSQV SRLVEEKKTI 420 SCDLKASEKK ASEFKRSLEI SRDEMGILKD NYKKLGIVVL EGVTDVEKNI KQQIQLLAPN 480 LDISKVGAYR HVVNGQIVDL LN

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence Send to blast

MDLNTKPLAE LLEVDEAGFH LCNEVGHSES NNDIGDLRTT VDEGPVGENP REGMCFGADP  60
GNEDPREGMC FGTLLEARNY YHRYAAKMGF VAKIRNTNYE KHSKDKIPIN QSIHCNKDGH  120
RISQKRAPKR AKTITSVGCK ARCYVRLDKS TGLWKVSKLE LSHTHPLNPK PSAILENREL  180
FLHTKDLIQR NDEVDRQPNK TFQASTMDMD RKISNLNAIH QSLLTRWTAE SAREQGSSSA  240
TPSDVIIKDE TPFPVNNQTP SDVIIKDKSP ILVNIQNIPE EPSPSPLHSL PEKNRKKGED  300
TEAGCASEVV SDHDFGFVLK NTFDAGGFID QYLLNSSTVE VLENIPANEN ISRMQRMLLK  360
SAILCRDMER SFSDLQKLKE KLVAKEKEIA FLTAQNIELS SKTIELSSQV SRLVEEKKTI  420
SCDLKASEKK ASEFKRSLEI SRDEMGILKD NYKKLGIVVL EGVTDVEKNI KQQIQLLAPN  480
LDISKVGAYR HVVNGQIVDL LN

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.2PP50

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025610678.1	0.0	uncharacterized protein LOC112703446
TrEMBL	A0A445CHF1	0.0	A0A445CHF1_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF14126	2	17

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	3e-14	FAR1 family protein