PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.23R92
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family DBB
Protein Properties Length: 299aa    MW: 32697.9 Da    PI: 6.8365
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.23R92genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box21.35.6e-07443538
     zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
                  C+ +++ e++ fC+ ++  lC+ C    H+       H+
  Aradu.23R92  4 QCDVCSKDEASVFCTADEAALCNGCDHRVHHAnklaskHQ 43
                 7******99******************9964446666676 PP
2zf-B_box27.28.1e-095793438
     zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38
                 + C+ ++e ++  fC++++  lC+dC   +H+   Ht
  Aradu.23R92 57 PLCDVCKERRAYVFCQQDRAILCKDCDIPIHSAneHT 93
                 78*****************************657866 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011910.651147IPR000315B-box-type zinc finger
CDDcd000211.36E-5347No hitNo description
SMARTSM003362.4E-5447IPR000315B-box-type zinc finger
SMARTSM003361.7E-1454101IPR000315B-box-type zinc finger
PROSITE profilePS501199.9454101IPR000315B-box-type zinc finger
PfamPF006436.6E-75794IPR000315B-box-type zinc finger
CDDcd000212.67E-1057101No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009641Biological Processshade avoidance
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MKIQCDVCSK DEASVFCTAD EAALCNGCDH RVHHANKLAS KHQRFSLLRL STKQNFPLCD  60
VCKERRAYVF CQQDRAILCK DCDIPIHSAN EHTKKHTRFL VTGVKLSDSA KLYSAATTPP  120
PPPLIGSNSS SDSNSKASQI PKSLVSEPTS SAASTGLPPI KGGSLVGVAE EDASTSTRSI  180
SEYLIETIPG WQVEDFLDSS TVPFGFSKGG DEMFSVFDGE IDGNMYAFST MEKMGMWVPQ  240
APPPPPPPLV YPSQFCEAKD VTNNNIKGSI SRSRLGDDNF IVPQISLQSN NTKRPRYLW
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.23R92
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015969663.10.0B-box zinc finger protein 20
TrEMBLA0A445CK090.0A0A445CK09_ARAHY; Uncharacterized protein
STRINGGLYMA17G37430.21e-108(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14483494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75540.11e-75salt tolerance homolog2