PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.1J1DY
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Dof
Protein Properties Length: 306aa    MW: 34536.3 Da    PI: 7.4227
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.1J1DYgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.48.8e-4044103261
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                  +e+alkcprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+s
  Aradu.1J1DY  44 PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRS 103
                  7899******************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027013.7E-3446102IPR003851Zinc finger, Dof-type
ProDomPD0074781.0E-234796IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.64648102IPR003851Zinc finger, Dof-type
PROSITE patternPS0136105086IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005730Cellular Componentnucleolus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MDPSSGQQNH QQMANNNNNQ SLESMMLGCT KQEQQQEKKP RPQPEQALKC PRCDSTNTKF  60
CYYNNYSLSQ PRYFCKSCRR YWTKGGTLRN VPVGGGCRKN KRSCSSSSKR AQDQLPFNPD  120
HNPLMNSLPP LSYDSEFTLA LARLQKQTGG VHLGLDDHHD LSMLVNHTNT NTNTTTQQQQ  180
QQQQGFLDAL RSNGFNSNTM HSDLYYGGNG DMGEVYNEIM LPYEQEMSVE TTQAVTVTTT  240
KQELCNVSYN CNNTNNNNKV LWGFPWQING ETNMLGDIDL SRASWNGNGP LTTPLSWHGL  300
LNSPLM
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.1J1DY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015952352.10.0dof zinc finger protein DOF2.1
TrEMBLA0A445E4G71e-179A0A445E4G7_ARAHY; Uncharacterized protein
STRINGGLYMA12G07710.11e-108(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50263051
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28510.17e-38Dof family protein