PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.154AS
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 274aa    MW: 31152.2 Da    PI: 4.6317
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.154ASgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR147.37e-15101167167
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklk 67 
                  +fY +Y+k+ GFs rksk+ k+  +gei+++ fvC ++g+r e+  + +++++++r etrtgC+a++ 
  Aradu.154AS 101 DFYMKYSKSKGFSARKSKTFKN-SSGEIYRQMFVCHRQGFRMEKYYTmEKRKKEPRLETRTGCEARMD 167
                  6*****************9998.8899****************998856777789***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.4E-12101167IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MSGIFTDTEM NEQYQEDDDF NQQEELVSDQ DMMDEQTEFE QDFRDEFSEG AFFSESDMLD  60
YIVEAAYAVD SVQDITSLKF SENFADEIGK YHFSTLQLAF DFYMKYSKSK GFSARKSKTF  120
KNSSGEIYRQ MFVCHRQGFR MEKYYTMEKR KKEPRLETRT GCEARMDQRS PSPPSSPPFP  180
VHERRLRLQF LSTAASSSSP CPEPMLPPSM LSAPSVAWPS LVARCPAFPL SVRPPWLICF  240
VGLEQLAAVS PLAVVSRVAV VSLVAVRASI EGSV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.154AS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025611732.11e-115protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445BUF61e-116A0A445BUF6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1661226
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.14e-08FAR1-related sequence 10