PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe7G419500.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | ERF | ||||||||
Protein Properties | Length: 188aa MW: 21002.6 Da PI: 4.4041 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.8 | 2.1e-16 | 22 | 70 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +kGVr + +g Wv+eIr p + r++lg+f+ +e+Aa+a++aa +l+g Aqcoe7G419500.1.p 22 FKGVRMRT-WGTWVSEIRIP-----HskERIWLGSFDAPEKAARAYDAALYCLRG 70 8****998.**********6.....336*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 1.5E-28 | 21 | 84 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.112 | 21 | 78 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 4.8E-27 | 21 | 79 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 8.6E-9 | 22 | 70 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.23E-27 | 22 | 80 | No hit | No description |
SuperFamily | SSF54171 | 1.9E-18 | 22 | 79 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 1.1E-7 | 22 | 33 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-7 | 44 | 60 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence Send to blast |
MGSPSKKPRT GDLKLGKEDA SFKGVRMRTW GTWVSEIRIP HSKERIWLGS FDAPEKAARA 60 YDAALYCLRG SEGKFNFPDD ERPQIPDNSI EPLSTTEIKA IASRFASSEC MSVLSSTSVF 120 PTIKPPEVVD RGVEVESKFD VDSLFVADFP DHDTFFSESF ILDELITFEP DSIWAVLEET 180 ENLLTEK* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 1e-15 | 10 | 80 | 3 | 74 | Ethylene-responsive transcription factor ERF096 |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00463 | DAP | Transfer from AT4G31060 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_026458490.1 | 2e-48 | ethylene-responsive transcription factor ERF015-like | ||||
TrEMBL | A0A2G5F1Y2 | 3e-79 | A0A2G5F1Y2_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_002_00165.1 | 4e-80 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31060.1 | 5e-43 | ERF family protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe7G419500.1.p |