PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G184100.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family B3
Protein Properties Length: 368aa    MW: 41710.4 Da    PI: 6.6705
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G184100.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.81.5e-16100189198
                        EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                        f+k +++  v +  +l +p +f+++h   +  ++t++lede+g +++  +  ++k+    l++GW+ F+ a++L++gD +vF+l+  + ++l
  Aqcoe7G184100.2.p 100 FIKSMVRTQVYSCFWLGIPTEFCQNHL--PSDDVTIVLEDEDGLEYNSVYLADRKG----LSGGWRAFALAHKLDDGDALVFELT--EPRRL 183
                        899********************8884..34679****************767776....***********************85..56667 PP

                        EEEEE- CS
                 B3  93 vvkvfr 98 
                         + +f+
  Aqcoe7G184100.2.p 184 EIYIFK 189
                        887775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019364.71E-2195189IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.8E-1896189IPR015300DNA-binding pseudobarrel domain
CDDcd100174.20E-2398189No hitNo description
PROSITE profilePS5086312.52100191IPR003340B3 DNA binding domain
PfamPF023629.0E-15100189IPR003340B3 DNA binding domain
SMARTSM010197.9E-18100191IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MVRIRKNKLH NINNNNNNNN NVFEEIPKQE SLDEINKEEL PVEIDTEFSR PLKRLKSSSW  60
QRYSARPLNE IKFASDEERA YAIQCAENFQ RNLLSGYPCF IKSMVRTQVY SCFWLGIPTE  120
FCQNHLPSDD VTIVLEDEDG LEYNSVYLAD RKGLSGGWRA FALAHKLDDG DALVFELTEP  180
RRLEIYIFKA FELHTRKVVK NSDKKANSDK TTSKNRETKD TKNSNKKAAK LNQDENSAVE  240
NDYPSTSSKA HTGGDGLKTA ASRSNEGISV LEEALQSYED SEGSVSSMVP REGLCKGERD  300
QTSCRITATG GWKRTDFCCN EQTFESREDG KSCEGGGSSV SPLVQLSDDL WFGKKEIRTK  360
FFRRKRT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010650799.16e-62PREDICTED: putative B3 domain-containing protein At5g58280 isoform X1
TrEMBLA0A2G5FB080.0A0A2G5FB08_AQUCA; Uncharacterized protein
STRINGAquca_001_00536.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.14e-51B3 family protein