PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Aqcoe7G173600.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 127aa MW: 13806.5 Da PI: 8.4756 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 30.1 | 1.6e-09 | 50 | 99 | 1 | 49 |
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkkte 49 ++Y+eY+++ GF +rk++s+k+ +e t+ +fvCs+egk+ +++++ Aqcoe7G173600.1.p 50 EYYEEYGRQNGFCMRKRSSNKTiIGVDELTSVKFVCSREGKHIKRTENGA 99 69******************99766778**************99998822 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 5.3E-7 | 50 | 100 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 127 aa Download sequence Send to blast |
MGVPNTSSSG LDGTDKIFEN GKTVDAHIYG EKLKAPYVGL SFDSIDEAKE YYEEYGRQNG 60 FCMRKRSSNK TIIGVDELTS VKFVCSREGK HIKRTENGAN NVPSRSCSTI NGNVKHACGF 120 CTIGKN* |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_026378309.1 | 6e-19 | protein FAR1-RELATED SEQUENCE 5-like | ||||
TrEMBL | A0A200QTB8 | 1e-16 | A0A200QTB8_9MAGN; FAR1 DNA binding domain |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G06250.1 | 2e-08 | FAR1-related sequence 7 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Aqcoe7G173600.1.p |