PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G048700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ARR-B
Protein Properties Length: 579aa    MW: 64841.6 Da    PI: 5.055
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G048700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like67.81.8e-21215268155
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        k+r++Wt++LHe+F++a++ L    + +Pk+il lm+v gL++ +v+SHLQkYR+
  Aqcoe7G048700.1.p 215 KTRVVWTSQLHENFLQALSIL-SMGRVVPKRILALMNVRGLSRGNVASHLQKYRM 268
                        68*******************.99******************************8 PP
2Response_reg73.86.8e-2571121106
                        EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS
       Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90 
                        vl+vdD+++ + + +++l+ ++y +v++a+ g+ea+ +lk++d  +Dl++ D+ mpgmdG++ll+  r+   ++p +++++  e +++++ l
  Aqcoe7G048700.1.p   7 VLVVDDDRSTLLIAERMLTTKHY-NVTTATGGREAISCLKKSDgqFDLVISDLYMPGMDGFQLLEIVRTVY-NIPFVFMSSDYELDLMERGL 96 
                        89*********************.******************99*********************999988.******************** PP

                        HTTESEEEESS--HHH CS
       Response_reg  91 kaGakdflsKpfdpee 106
                        +aGa+ f+ Kp  + +
  Aqcoe7G048700.1.p  97 EAGARYFFQKPLTMMD 112
                        ***********87765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521721.02E-295112IPR011006CheY-like superfamily
SMARTSM004489.3E-265117IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23002.6E-295123No hitNo description
PROSITE profilePS5011034.8566121IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.1E-207110IPR001789Signal transduction response regulator, receiver domain
CDDcd001564.80E-278110No hitNo description
SuperFamilySSF466891.34E-16213272IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.2E-21214272IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-20215268IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 579 aa     Download sequence    Send to blast
MRVGLCVLVV DDDRSTLLIA ERMLTTKHYN VTTATGGREA ISCLKKSDGQ FDLVISDLYM  60
PGMDGFQLLE IVRTVYNIPF VFMSSDYELD LMERGLEAGA RYFFQKPLTM MDYENMWQFV  120
YTENVEYFQG IYIEQGLPPP PPPPIFPQDR SSSLSISDDI HRQGRNSSSS SSTSNGKKRR  180
QDDGYDCKKQ KRPYKKHGKE DQDLGKTSAA VPLKKTRVVW TSQLHENFLQ ALSILSMGRV  240
VPKRILALMN VRGLSRGNVA SHLQKYRMYQ NKYKGTSGSD YPSRRIRMRL PDETEYHDYS  300
PSQDHYSYQD QLGLAGLQDN FCPPNNFNHV PLVRPQYHFQ EGSNDNFMPQ ANYEHPDAIT  360
NPGYLGKPWM SGAPTMNQSN VGMYPGLFGT SAPLYCNDMN IGSTTNGTPL MAEQRITQGN  420
AGFLLNAPLD PNFGNLGFES QHNSPSSVDI GNMGPFGAWN ELLTETMGGE IPNNDNSADK  480
GKKIVEEPED EFSFPDNPLY FNGMNFNLTS QAEPFVVNPN YAVVGESSTR ALVNPNKLQS  540
GSEVNNNSWC NSVDDIVDFL FNQGFENANE ACVIPLNP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5lxu_A5e-15215269155Transcription factor LUX
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DF200.0A0A2G5DF20_AQUCA; Uncharacterized protein
STRINGAquca_021_00136.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.23e-45response regulator 1