PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Aqcoe7G023800.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 188aa MW: 21111.7 Da PI: 9.068 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 35 | 2.9e-11 | 128 | 150 | 1 | 23 |
---SS-EEEEEEE--TT-SS-EE CS WRKY 1 ldDgynWrKYGqKevkgsefprs 23 ldDgy+WrKYGqK+vk+s +pr+ Aqcoe7G023800.2.p 128 LDDGYRWRKYGQKSVKNSLHPRK 150 59*******************95 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.0E-12 | 115 | 150 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.79E-9 | 121 | 150 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.438 | 123 | 149 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.6E-4 | 128 | 173 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.8E-8 | 129 | 150 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 188 aa Download sequence Send to blast |
MEGRGHNIPP SNPSYIFTPS TLALPSLPPS LLHLQQHQPC QQPQQEPHDE MVGDIDWVSL 60 FSAPNINMLD SNQQLSASTS SVTVGSRGDG EINNDGIGKD KGKSSRSRTK KVCRPRFAFQ 120 TRSADDILDD GYRWRKYGQK SVKNSLHPRK LILWDFFISG NSYYGIFFIF HAPPESQTNI 180 EYKRMNG* |
Binding Motif ? help Back to Top | |||
---|---|---|---|
Motif ID | Method | Source | Motif file |
MP00539 | DAP | Transfer from AT5G41570 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_012083303.1 | 1e-30 | probable WRKY transcription factor 43 | ||||
TrEMBL | A0A2G5E0D4 | 1e-106 | A0A2G5E0D4_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_013_00218.1 | 1e-107 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G41570.1 | 5e-18 | WRKY DNA-binding protein 24 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Aqcoe7G023800.2.p |