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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe7G021100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | WRKY | ||||||||
Protein Properties | Length: 349aa MW: 38972.4 Da PI: 4.9225 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.8 | 3.5e-31 | 159 | 217 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp +++itY+ eHnh+ Aqcoe7G021100.1.p 159 SDMWAWRKYGQKPIKGSPYPRGYYRCSSSkGCLARKQVERSRSDPAMFIITYTAEHNHP 217 79*************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 9.2E-32 | 144 | 219 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 34.612 | 153 | 219 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.57E-26 | 156 | 219 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.0E-37 | 158 | 218 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.8E-26 | 160 | 217 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010150 | Biological Process | leaf senescence | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence Send to blast |
MEEDWDLQAV VRGCRTSNST TNTTTTTTTV TTATSIMVDN ESFSCFPTLG FQQQENFLCM 60 PDLFESKTVL EELEQLYKPF LPKFELPISP LNSLSNSTSF SAPVFHQQEQ QQVPQIKQEQ 120 QHQQPRRSLS TSTITPRPKR RKNQQKKVVC QVPAEGISSD MWAWRKYGQK PIKGSPYPRG 180 YYRCSSSKGC LARKQVERSR SDPAMFIITY TAEHNHPVPT HRNSLAGSTR HKLTTPQTPT 240 TPTTTTISKL PSTSSPMGLS PTTPLTTSME EEEEDELLLK QSKQEEGEDD DDEFGISRLE 300 ELMSDDLFME LDEMAGADSS GVVPATFDDC FNSSHWFNTN SATAAGGV* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 1e-21 | 147 | 220 | 6 | 80 | Disease resistance protein RRS1 |
5w3x_D | 1e-21 | 147 | 220 | 6 | 80 | Disease resistance protein RRS1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00422 | DAP | Transfer from AT4G01250 | Download |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010261384.1 | 1e-101 | PREDICTED: WRKY transcription factor 22-like | ||||
TrEMBL | A0A2G5E067 | 0.0 | A0A2G5E067_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_013_00193.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01250.1 | 3e-48 | WRKY family protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe7G021100.1.p |