PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G017500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 323aa    MW: 37159.4 Da    PI: 4.7481
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G017500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.2e-19111159254
                AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                        +y+GVr+++ +g+W+AeIrd ++    ++r++lg+f taeeAa+ +++a+ ++ 
  Aqcoe7G017500.1.p 111 KYRGVRQRP-WGKWAAEIRDpFK----KARIWLGTFETAEEAARVYDKAAIRFQ 159
                        8********.**********662....5**********************9875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103223.894111168IPR001471AP2/ERF domain
CDDcd000188.45E-35111167No hitNo description
SuperFamilySSF541711.96E-21111167IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-30111168IPR001471AP2/ERF domain
PfamPF008472.8E-12111158IPR001471AP2/ERF domain
SMARTSM003804.5E-37111174IPR001471AP2/ERF domain
PRINTSPR003671.4E-11112123IPR001471AP2/ERF domain
PRINTSPR003671.4E-11134150IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MDSSCDFFAS PKTKVIEHKT VTNKFVKPSS KIMLKTVRIS VTDENPTDSS SDEEENIFFK  60
GRRVKRYINE INIEKRSAAK VEEKKKKNIQ CSEQQQQCQD DDEEEEEVKI KYRGVRQRPW  120
GKWAAEIRDP FKKARIWLGT FETAEEAARV YDKAAIRFQG VKAQTNFIKP PGSSHVPIHY  180
LRSRTKRCKM QEEEKEISSS HCDSSNSIES KVVVISSPTS VLKPPQTEEE QKEKVDEELT  240
SVDQEFLLSD QMFENVEAPS MTELFDDSLK CVGSYLFDDN KLSVGDDHFG DNFDGSIDNF  300
EVESSSWMWN MDSFKEIGDF FD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-22112167359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181186RSRTKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5E0090.0A0A2G5E009_AQUCA; Uncharacterized protein
STRINGAquca_013_00161.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.15e-43cytokinin response factor 4