PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe7G014800.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 347aa    MW: 39358.9 Da    PI: 5.8926
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe7G014800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.79.7e-28120180259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                        +Dg++WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+rs+edp v+++tY+g+H+++
  Aqcoe7G014800.1.p 120 EDGHSWRKYGQKDILGAKYPRGYYRCTHRhvqGCLATKQVQRSDEDPLVFDVTYRGKHTCN 180
                        7***************************99999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.6E-28110180IPR003657WRKY domain
PROSITE profilePS5081122.286114182IPR003657WRKY domain
SuperFamilySSF1182903.4E-25118181IPR003657WRKY domain
SMARTSM007745.9E-40119181IPR003657WRKY domain
PfamPF031061.4E-26120179IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MENCKDYEQK PLINELTQAK ELVNQLRFHL SPTSSTGEIL IQQILSSYDK ALLMLNWNRS  60
EIETHVPISP SVGMIESPQS GSPRSEDSEI RDIYKKRKTM PRWTEQVRVS SGTGSEGPQE  120
DGHSWRKYGQ KDILGAKYPR GYYRCTHRHV QGCLATKQVQ RSDEDPLVFD VTYRGKHTCN  180
PSSLLQASQA FSKGDQTHNQ DQLLEQRKRK QPEEMLQNFR AGLTVKTENP DTRELTSSPF  240
SFPSMMSTEC IKSENNIFSP LSLENSYMGC YSPFISPATS ESNYFSPCHI NNIARKQPFR  300
TSESDLNEII SAATSASNSL VMDIEFNLDS LEFDSNFPFD NPSFFS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-19120179968OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1205210QRKRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010266466.11e-125PREDICTED: probable WRKY transcription factor 41
TrEMBLA0A2G5E0260.0A0A2G5E026_AQUCA; Uncharacterized protein
STRINGAquca_013_00135.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.12e-51WRKY family protein