PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G184900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 219aa    MW: 24929.3 Da    PI: 4.2997
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G184900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.42.7e-11752153
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53
                       s+y GV +  +++++++eIr       + kr +lg+f t+e+Aa+a+++ +   
  Aqcoe6G184900.1.p  7 SRYIGVQR--RDKKYASEIRI------SgKRRWLGTFSTEEQAARAYDKVAYGA 52
                       7899**54..368********......44*******************998755 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.34E-19764No hitNo description
PfamPF008474.0E-5750IPR001471AP2/ERF domain
SuperFamilySSF541714.38E-15764IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.2E-19862IPR001471AP2/ERF domain
SMARTSM003802.1E-16868IPR001471AP2/ERF domain
PROSITE profilePS5103215.685862IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MGITKKSRYI GVQRRDKKYA SEIRISGKRR WLGTFSTEEQ AARAYDKVAY GARGSKAKLN  60
FPYNNIFSQN LDTSLQVFSS ASAISNEDAE ENLLVQDDRQ DKKIISQNLD TSLQVFSSAS  120
TINNEDAEEN LLVQDDQQDK NIFSQNLDTS LQVFSSASAI SYEDAEENLL VQDDHQDKKC  180
NDFDDWVKYV LDNFSEETLM LWAGYLLDFI RECHGNEE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-137631373Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DK874e-57A0A2G5DK87_AQUCA; Uncharacterized protein
STRINGAquca_018_00164.16e-58(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.18e-16ERF family protein