PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe6G101400.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | B3 | ||||||||
Protein Properties | Length: 257aa MW: 29595.8 Da PI: 9.8438 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 46.2 | 8.1e-15 | 1 | 59 | 37 | 99 |
EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +l+d+ gr+W v++ + + +++++GW+eFvk + L +g+f+vF++dg+s+f vk++++ Aqcoe6G101400.3.p 1 MLKDSVGRVWHVEV--KEVENDFFFQSGWQEFVKMHSLVVGEFLVFRYDGNSTF--EVKLYDH 59 6899**********..999999****************************9999..8887776 PP | |||||||
2 | B3 | 46.9 | 5.1e-15 | 159 | 241 | 12 | 96 |
HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS B3 12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 ++ + +pk+ + ++++k + ++ l+d++g+sW +++ k +++ + +GW +F+k n+Lke+D + F++ ++ s++++ + v Aqcoe6G101400.3.p 159 ARYFVHIPKQVLIDNNIK--IQPKIFLRDPNGKSWPASVRFAKDGRTQ-ICSGWYDFCKGNNLKENDKCKFEFLQTrSRGKFIIDV 241 555678*****9999665..4449***************998887665.666********************88776988877765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM01019 | 0.62 | 1 | 60 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 1.7E-12 | 1 | 58 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 14.833 | 1 | 60 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 5.77E-13 | 2 | 58 | No hit | No description |
Gene3D | G3DSA:2.40.330.10 | 6.5E-16 | 2 | 62 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 5.49E-16 | 2 | 65 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 1.4E-18 | 141 | 242 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 2.35E-19 | 143 | 244 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 12.985 | 148 | 245 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 6.0E-8 | 149 | 245 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 6.59E-13 | 151 | 239 | No hit | No description |
Pfam | PF02362 | 1.2E-13 | 163 | 241 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MLKDSVGRVW HVEVKEVEND FFFQSGWQEF VKMHSLVVGE FLVFRYDGNS TFEVKLYDHS 60 GCEKEETLDD KNINKAVCFI KEEDNKEASN ARRKPILAIC DSKHKGSKVL KKADKSRYGF 120 SRPERISAKY VQKNMVSKAS ETDQPKPHFD VVVNGNGTAR YFVHIPKQVL IDNNIKIQPK 180 IFLRDPNGKS WPASVRFAKD GRTQICSGWY DFCKGNNLKE NDKCKFEFLQ TRSRGKFIID 240 VHIPRTKRKG FCVADT* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2G5E9H5 | 0.0 | A0A2G5E9H5_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_010_00344.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66980.1 | 6e-20 | B3 family protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe6G101400.3.p |