PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe6G084800.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

CAMTA

Protein Properties

Length: 1084aa MW: 121874 Da PI: 6.0808

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe6G084800.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	177	2.5e-55	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenpt 93 l+ ++rwl++ ei++iL+n+++++++ e++++p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyYah+een + Aqcoe6G084800.1.p 20 LDAQSRWLRPVEICEILQNYRNFKISPEPPNKPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVNEAHERLKAGSVDVLHCYYAHGEENGN 111 56799************************************************************************************* PP CG-1 94 fqrrcywlLeeelekivlvhylevk 118 fqrr+ywlLee++ +ivlvhy+evk Aqcoe6G084800.1.p 112 FQRRSYWLLEEAFMHIVLVHYREVK 136 ********************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51437	80.571	15	141	IPR005559	CG-1 DNA-binding domain
SMART	SM01076	4.8E-74	18	136	IPR005559	CG-1 DNA-binding domain
Pfam	PF03859	1.0E-48	22	134	IPR005559	CG-1 DNA-binding domain
Gene3D	G3DSA:2.60.40.10	8.1E-6	498	586	IPR013783	Immunoglobulin-like fold
Pfam	PF01833	4.9E-5	500	574	IPR002909	IPT domain
SuperFamily	SSF81296	5.91E-17	501	587	IPR014756	Immunoglobulin E-set
PROSITE profile	PS50297	18.457	667	805	IPR020683	Ankyrin repeat-containing domain
Gene3D	G3DSA:1.25.40.20	4.7E-18	684	800	IPR020683	Ankyrin repeat-containing domain
SuperFamily	SSF48403	2.33E-17	686	797	IPR020683	Ankyrin repeat-containing domain
CDD	cd00204	1.14E-13	690	793	No hit	No description
Pfam	PF12796	1.0E-6	707	797	IPR020683	Ankyrin repeat-containing domain
SMART	SM00248	0.057	734	763	IPR002110	Ankyrin repeat
SMART	SM00248	9.7	773	802	IPR002110	Ankyrin repeat
SMART	SM00015	7.4	908	930	IPR000048	IQ motif, EF-hand binding site
SuperFamily	SSF52540	2.31E-7	909	959	IPR027417	P-loop containing nucleoside triphosphate hydrolase
PROSITE profile	PS50096	8.059	909	938	IPR000048	IQ motif, EF-hand binding site
Pfam	PF00612	0.016	911	929	IPR000048	IQ motif, EF-hand binding site
SMART	SM00015	0.047	931	953	IPR000048	IQ motif, EF-hand binding site
PROSITE profile	PS50096	9.523	932	956	IPR000048	IQ motif, EF-hand binding site
Pfam	PF00612	2.6E-4	936	953	IPR000048	IQ motif, EF-hand binding site

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009409	Biological Process	response to cold
GO:0010150	Biological Process	leaf senescence
GO:0042742	Biological Process	defense response to bacterium
GO:0050832	Biological Process	defense response to fungus
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0005516	Molecular Function	calmodulin binding

Sequence ? help Back to Top
Protein Sequence Length: 1084 aa Download sequence Send to blast
MAESRRYTVD NHLDIEQILL DAQSRWLRPV EICEILQNYR NFKISPEPPN KPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVNEAHER LKAGSVDVLH CYYAHGEENG NFQRRSYWLL 120 EEAFMHIVLV HYREVKGSKT GFSRLRDNDT VSSSHSSSPL SSSAITNSNQ AASPTDSTSL 180 TSGQSQTSEC EDFESDLHQA SSTPHSHLGL QHIKDEFVTS QVHGGLSNPY VSVSYPSNHY 240 DKLGNPSVNS GPSLVSLGQE FKGRHYSDAG YELNFDAPKQ LDLASWEQVL EHCNSGFGSS 300 VSSTQYHSPE QENVILGKLL RDELNIEQED VGRLEGQKKW QIASEDSSSN IYKWSLEQKL 360 LADPDHDPSQ PFRMHPEQQK GHPLQNDQQT RLPNAEFESL LNSNFESVLN GDDIYNDFST 420 AKQPALDSIR TDEVLKKVDS FTRWMSNELG EVSNSQMQPI SAVDWDTVGS ERVSDDASIS 480 SQYLEPYSLS PSLSKEQLFS ITDFSPNWAY EGSEAKVLIT GKFLKSREDL EKYKWSCMFG 540 EIEVPVEVSA NGVLHCHAPQ HTVGRVPFYV TCSNRVACSE VREFEFRISR TQDFIMTDPD 600 SVSMSDMLLH IRLQNLLSLD SVCHPSYFGS HGENSYMNTN ISLLMKDDGK ACQMVKITSE 660 ESYAGDEKEQ RLQETLKENL NSWLLQKVTE EGKGPNVLDK EGQGVIHLAS ALGYDWAIAP 720 TVATGVNINF RDVNGWTALH WAAFCGRERT VGLLVSLNAA PGALTDPTPK FPSGRTPADL 780 ASSNGHKGIA GYLAESSLTI HLSSLTMKET GNRALPDIAE VGATQKVPEH GATQFYDINV 840 PDTSLKDSLT AVCNATQAAA RIHQVFRVQS FQRKQLVEYG DEKFGMSDER ALSLITVKKN 900 RQGVHGEPSH VAAMRIQNKF RGWKGRKEFL VIRQQIVKIQ AHVRGHQVRK HYRSIVWSVG 960 ILEKVILRWR RKGSGLRGFQ SEALIGGSTA QSGPSKEDDY DFLKEGRKQT EERLQKALAR 1020 VKSMVQYPEA RDQYRRLMTV VTDFQETKVV YDNLLNTSEE PSDGYDDMID LESLLTDDSF 1080 MYT*

Sequence ? help Back to Top

Protein Sequence Length: 1084 aa Download sequence Send to blast

MAESRRYTVD NHLDIEQILL DAQSRWLRPV EICEILQNYR NFKISPEPPN KPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVNEAHER LKAGSVDVLH CYYAHGEENG NFQRRSYWLL  120
EEAFMHIVLV HYREVKGSKT GFSRLRDNDT VSSSHSSSPL SSSAITNSNQ AASPTDSTSL  180
TSGQSQTSEC EDFESDLHQA SSTPHSHLGL QHIKDEFVTS QVHGGLSNPY VSVSYPSNHY  240
DKLGNPSVNS GPSLVSLGQE FKGRHYSDAG YELNFDAPKQ LDLASWEQVL EHCNSGFGSS  300
VSSTQYHSPE QENVILGKLL RDELNIEQED VGRLEGQKKW QIASEDSSSN IYKWSLEQKL  360
LADPDHDPSQ PFRMHPEQQK GHPLQNDQQT RLPNAEFESL LNSNFESVLN GDDIYNDFST  420
AKQPALDSIR TDEVLKKVDS FTRWMSNELG EVSNSQMQPI SAVDWDTVGS ERVSDDASIS  480
SQYLEPYSLS PSLSKEQLFS ITDFSPNWAY EGSEAKVLIT GKFLKSREDL EKYKWSCMFG  540
EIEVPVEVSA NGVLHCHAPQ HTVGRVPFYV TCSNRVACSE VREFEFRISR TQDFIMTDPD  600
SVSMSDMLLH IRLQNLLSLD SVCHPSYFGS HGENSYMNTN ISLLMKDDGK ACQMVKITSE  660
ESYAGDEKEQ RLQETLKENL NSWLLQKVTE EGKGPNVLDK EGQGVIHLAS ALGYDWAIAP  720
TVATGVNINF RDVNGWTALH WAAFCGRERT VGLLVSLNAA PGALTDPTPK FPSGRTPADL  780
ASSNGHKGIA GYLAESSLTI HLSSLTMKET GNRALPDIAE VGATQKVPEH GATQFYDINV  840
PDTSLKDSLT AVCNATQAAA RIHQVFRVQS FQRKQLVEYG DEKFGMSDER ALSLITVKKN  900
RQGVHGEPSH VAAMRIQNKF RGWKGRKEFL VIRQQIVKIQ AHVRGHQVRK HYRSIVWSVG  960
ILEKVILRWR RKGSGLRGFQ SEALIGGSTA QSGPSKEDDY DFLKEGRKQT EERLQKALAR  1020
VKSMVQYPEA RDQYRRLMTV VTDFQETKVV YDNLLNTSEE PSDGYDDMID LESLLTDDSF  1080
MYT*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3'. Binds calmodulin in a calcium-dependent manner in vitro (PubMed:12218065). Regulates transcriptional activity in response to calcium signals (Probable). Involved in freezing tolerance in association with CAMTA1 and CAMTA2 (PubMed:23581962). Required for the cold-induced expression of DREB1B/CBF1, DREB1C/CBF2, ZAT12 and GOLS3 (PubMed:19270186). Involved in response to cold. Contributes together with CAMTA5 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). Involved together with CAMTA2 and CAMTA4 in the positive regulation of a general stress response (GSR) (PubMed:25039701). Involved in the regulation of GSR amplitude downstream of MEKK1 (PubMed:25157030). Involved in the regulation of a set of genes involved in defense responses against pathogens (PubMed:18298954). Involved in the regulation of both basal resistance and systemic acquired resistance (SAR) (PubMed:21900483). Acts as negative regulator of plant immunity (PubMed:19122675, PubMed:21900483, PubMed:22345509, PubMed:28407487). Binds to the promoter of the defense-related gene EDS1 and represses its expression (PubMed:19122675). Binds to the promoter of the defense-related gene NDR1 and represses its expression (PubMed:22345509). Involved in defense against insects (PubMed:23072934, PubMed:22371088). Required for tolerance to the generalist herbivore Trichoplusia ni, and contributes to the positive regulation of genes associated with glucosinolate metabolism (PubMed:23072934). Required for tolerance to Bradysia impatiens larvae. Mediates herbivore-induced wound response (PubMed:22371088). Required for wound-induced jasmonate accumulation (PubMed:23072934, PubMed:22371088). Involved in the regulation of ethylene-induced senescence by binding to the promoter of the senescence-inducer gene EIN3 and repressing its expression (PubMed:22345509). {ECO:0000269\|PubMed:12218065, ECO:0000269\|PubMed:18298954, ECO:0000269\|PubMed:19122675, ECO:0000269\|PubMed:19270186, ECO:0000269\|PubMed:21900483, ECO:0000269\|PubMed:22345509, ECO:0000269\|PubMed:22371088, ECO:0000269\|PubMed:23072934, ECO:0000269\|PubMed:23581962, ECO:0000269\|PubMed:25039701, ECO:0000269\|PubMed:25157030, ECO:0000269\|PubMed:28351986, ECO:0000269\|PubMed:28407487, ECO:0000305\|PubMed:11925432}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00042	PBM	Transfer from AT2G22300	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By heat shock, UVB, salt, wounding, ethylene and methyl jasmonate (PubMed:11162426, PubMed:12218065). Induced by infection with the fungal pathogen Golovinomyces cichoracearum (powdery mildew) and the bacterial pathogen Pseudomonas syringae pv tomato strain DC3000 (PubMed:22345509). {ECO:0000269\|PubMed:11162426, ECO:0000269\|PubMed:12218065, ECO:0000269\|PubMed:22345509}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010269270.1	0.0	PREDICTED: calmodulin-binding transcription activator 3-like isoform X1
Refseq	XP_010269271.1	0.0	PREDICTED: calmodulin-binding transcription activator 3-like isoform X1
Swissprot	Q8GSA7	0.0	CMTA3_ARATH; Calmodulin-binding transcription activator 3
TrEMBL	A0A2G5E8R7	0.0	A0A2G5E8R7_AQUCA; Uncharacterized protein
STRING	Aquca_010_00201.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	signal responsive 1

Link Out ? help Back to Top
Phytozome	Aqcoe6G084800.1.p

Publications ? help Back to Top
Zhang L,Du L,Shen C,Yang Y,Poovaiah BW Regulation of plant immunity through ubiquitin-mediated modulation of Ca(2+) -calmodulin-AtSR1/CAMTA3 signaling. Plant J., 2014. 78(2): p. 269-81 [PMID:24528504] Benn G, et al. A key general stress response motif is regulated non-uniformly by CAMTA transcription factors. Plant J., 2014. 80(1): p. 82-92 [PMID:25039701] Rahman H,Yang J,Xu YP,Munyampundu JP,Cai XZ Phylogeny of Plant CAMTAs and Role of AtCAMTAs in Nonhost Resistance to Xanthomonas oryzae pv. oryzae. Front Plant Sci, 2016. 7: p. 177 [PMID:26973658] Benn G, et al. Plastidial metabolite MEcPP induces a transcriptionally centered stress-response hub via the transcription factor CAMTA3. Proc. Natl. Acad. Sci. U.S.A., 2016. 113(31): p. 8855-60 [PMID:27432993] Kidokoro S, et al. Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature. Plant Cell, 2017. 29(4): p. 760-774 [PMID:28351986] Lolle S, et al. Matching NLR Immune Receptors to Autoimmunity in camta3 Mutants Using Antimorphic NLR Alleles. Cell Host Microbe, 2017. 21(4): p. 518-529.e4 [PMID:28407487] Kim YS, et al. CAMTA-Mediated Regulation of Salicylic Acid Immunity Pathway Genes in Arabidopsis Exposed to Low Temperature and Pathogen Infection. Plant Cell, 2017. 29(10): p. 2465-2477 [PMID:28982964] Jacob F, et al. A dominant-interfering camta3 mutation compromises primary transcriptional outputs mediated by both cell surface and intracellular immune receptors in Arabidopsis thaliana. New Phytol., 2018. 217(4): p. 1667-1680 [PMID:29226970]