PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G030300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family GATA
Protein Properties Length: 265aa    MW: 30176.1 Da    PI: 7.1263
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G030300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA611.5e-19194228135
               GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                        Cs+Cg+ +Tp+WR+gp g+ktLCnaCG++y++ +l
  Aqcoe6G030300.1.p 194 CSHCGADSTPQWRQGPMGPKTLCNACGVRYKSGRL 228
                        *******************************9885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011411.965188224IPR000679Zinc finger, GATA-type
SMARTSM004012.2E-17188242IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.66E-14191251No hitNo description
Gene3DG3DSA:3.30.50.102.1E-15192226IPR013088Zinc finger, NHR/GATA-type
CDDcd002026.15E-17193250No hitNo description
PfamPF003203.5E-17194228IPR000679Zinc finger, GATA-type
PROSITE patternPS003440194219IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    Send to blast
MFQGFYYLKH IFLVFFCSTM TMPNCSMEGT GFSELGGGLF NFTLDDLGVV EDEEKWNSWQ  60
TELCVPQDPI EDLEWFPNFK DDWINLNSLC TITKDETMSR GPFLKSEDEV TDERNSFSTV  120
TDDHTMSDGL LLKNEDEVNN ERKFPVAVLH AKKPRTKRVH SRKPSWSSPF STSTGKKLPK  180
RKVVQEDNAG RRICSHCGAD STPQWRQGPM GPKTLCNACG VRYKSGRLVP EYRPLTSPSF  240
DSQIHSNSHK KIMRMKNTLE VSNI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DVJ00.0A0A2G5DVJ0_AQUCA; Uncharacterized protein
STRINGAquca_014_00291.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.11e-37GATA transcription factor 9