PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe6G029300.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family B3
Protein Properties Length: 444aa    MW: 50916 Da    PI: 9.7557
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe6G029300.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.75.6e-1528118196
                        EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE....E-SSS CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk....ldgrs 88 
                        ffkvl   d + +  l +p+kf++++g k   + t++le ++g+  ++ l  ++  +++++++GW++F++ n L+  D +vF+    l+++ 
  Aqcoe6G029300.2.p  28 FFKVL--MDGFHE-KLAIPRKFTSKFGWK--LPETVVLEGPDGKATNIGL--TRIEDEVYFGNGWSQFASNNSLEKHDLMVFRfnesLERDC 112
                        78888..555555.5***********877..7779***************..*******************************443333334 PP

                        EE..EEEE CS
                 B3  89 efelvvkv 96 
                        +f  +v++
  Aqcoe6G029300.2.p 113 CF--KVMF 118
                        44..5555 PP
2B345.71.1e-14324409186
                        EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg..rsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldg 86 
                        f+kv+++ +v  +  +++p kf++++ ++ +e   + l   +g  + W+v++i ++ ++    +++GW +Fv +n+L+ gD ++F+ld+
  Aqcoe6G029300.2.p 324 FIKVMKRTHVYMRFFMTIPPKFIRKNFSEVPE---MALLRVTGkaKAWKVTIITKGLDNLqPGISGGWADFVMENNLEKGDACLFELDN 409
                        89************************544344...4444444444*******7644443367899*********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019368.44E-2123124IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.108.0E-2023124IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.92825122IPR003340B3 DNA binding domain
CDDcd100175.32E-1526120No hitNo description
PfamPF023624.1E-1228118IPR003340B3 DNA binding domain
SMARTSM010191.1E-828122IPR003340B3 DNA binding domain
SuperFamilySSF1019361.06E-17318412IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.105.7E-19318426IPR015300DNA-binding pseudobarrel domain
CDDcd100171.51E-17322426No hitNo description
PfamPF023629.7E-13324409IPR003340B3 DNA binding domain
PROSITE profilePS5086312.548324428IPR003340B3 DNA binding domain
SMARTSM010198.0E-10324428IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    Send to blast
MARDCECCKQ WRKQLFWIDN EPPTVHFFFK VLMDGFHEKL AIPRKFTSKF GWKLPETVVL  60
EGPDGKATNI GLTRIEDEVY FGNGWSQFAS NNSLEKHDLM VFRFNESLER DCCFKVMFFD  120
KTACEKEGVA CVRESDKPGL DTNGIQSVQI NKDCTNNVLS SERSPCSSES SGKHSSERSW  180
DSIDSCYYVT SGEESSEDSS DSSSVNRQTR ENTFRVRHGY PSTLRVKKNP RQNLPVKKNR  240
KSANNDNLQK SNKVHVSRNK DRVPRADTKS KGKSRLNPTL SGTSKKLSYY RYFQSQRRPV  300
TFEEEYLTLK KAQALERNST KPHFIKVMKR THVYMRFFMT IPPKFIRKNF SEVPEMALLR  360
VTGKAKAWKV TIITKGLDNL QPGISGGWAD FVMENNLEKG DACLFELDNI NPNYESVVTV  420
DVTIFRVVDK IVPLNRMLVK PPL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DVK90.0A0A2G5DVK9_AQUCA; Uncharacterized protein
STRINGAquca_014_00282.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-22B3 family protein