PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe5G422600.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

TCP

Protein Properties

Length: 348aa MW: 36768.6 Da PI: 9.2348

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe5G422600.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	107.8	1.6e-33	66	182	2	103
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.... 88 a++++ + ++h+kv+gR+RR+R++a caar+F+L++eLG+++d++t+ WLl++a+ +++++tgt++ +as++ ++s ++ s + Aqcoe5G422600.1.p 66 AAARKASRDRHAKVEGRGRRIRIPAICAARIFQLTRELGHKSDGETVRWLLENAESSVIAATGTGTVPASSVsVEGSLTTTTP--STTittt 155 56788999********************************************************9999966632233333333..2222244 PP TCP 89 ...........kaaksaa.kskksqks 103 +a ++++ k+k++q++ Aqcoe5G422600.1.p 156 ltpapeqetksNATTKTTtKKKRKQSE 182 444444333322222222233333333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	3.3E-29	72	182	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	23.355	72	126	IPR017887	Transcription factor TCP subgroup

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence Send to blast
MAEPSNQTHT IPLVSLKEEL PETDPEQEYE ERSPTPPPPP SQPIGVVPLA AMPMPVQVKK 60 SAPLTAAARK ASRDRHAKVE GRGRRIRIPA ICAARIFQLT RELGHKSDGE TVRWLLENAE 120 SSVIAATGTG TVPASSVSVE GSLTTTTPST TITTTLTPAP EQETKSNATT KTTTKKKRKQ 180 SESDCVPAVM SSNSPISISS GLAPIGGSNP QGFVPMWGVT SDGRIIQSVP AGAFWMIPQL 240 CSNPTAAGTV NQQPQLWAFP PTMTPIMNMN FSAIQPTSCV NIANPIQVQA QVPSTTTSTV 300 TSLGVKASTK ASSTTSNYSS TTTTQLLKDF SLEIYGKQHD QSTSSKS*

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence Send to blast

MAEPSNQTHT IPLVSLKEEL PETDPEQEYE ERSPTPPPPP SQPIGVVPLA AMPMPVQVKK  60
SAPLTAAARK ASRDRHAKVE GRGRRIRIPA ICAARIFQLT RELGHKSDGE TVRWLLENAE  120
SSVIAATGTG TVPASSVSVE GSLTTTTPST TITTTLTPAP EQETKSNATT KTTTKKKRKQ  180
SESDCVPAVM SSNSPISISS GLAPIGGSNP QGFVPMWGVT SDGRIIQSVP AGAFWMIPQL  240
CSNPTAAGTV NQQPQLWAFP PTMTPIMNMN FSAIQPTSCV NIANPIQVQA QVPSTTTSTV  300
TSLGVKASTK ASSTTSNYSS TTTTQLLKDF SLEIYGKQHD QSTSSKS*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010272585.1	1e-82	PREDICTED: transcription factor TCP9-like
TrEMBL	A0A2G5CWY2	0.0	A0A2G5CWY2_AQUCA; Uncharacterized protein
STRING	Aquca_035_00256.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	1e-28	TCP family protein

Link Out ? help Back to Top
Phytozome	Aqcoe5G422600.1.p