PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G340300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 334aa    MW: 37106.8 Da    PI: 6.78
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G340300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.82.9e-11165212455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++l+P +    +k  sKa +L + ++Y++sLq
  Aqcoe5G340300.1.p 165 SHSLAERVRREKISERLKLLQSLVPGC----DKVTSKALMLDEIINYVQSLQ 212
                        8*************************9....555*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.88E-17159226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.06E-11159216No hitNo description
PROSITE profilePS5088816.063161211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.1E-17162225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-8165212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.2E-12167217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MAAFSYQHLS PFLDLSVLLP NSSPIKMSGL LEEGYIDNIS TCFPYSSLSE HFQEFPIEKQ  60
RTDSSSIVVD LEGSTSDHQV TDQMDMTPVE EKKRKNRDGS CLSSSESKDS KISTRAKKQR  120
NCSGNINDAE KKMSKDEKKN QKKDSEVAQS GYVHVRARRG EATDSHSLAE RVRREKISER  180
LKLLQSLVPG CDKVTSKALM LDEIINYVQS LQHQVEFLSM KLASMSPIAY DMGGLDINSL  240
VKQEKLSSLS SALLPPVQLS NTVADITASF TTANSSNLLM NSPVSYLLQQ AAGQRPNNVL  300
CQQDNGNLLW SVDQQRPTRF FNQSDFSSLC SFQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010250560.18e-84PREDICTED: transcription factor bHLH137-like isoform X1
TrEMBLA0A2G5C4480.0A0A2G5C448_AQUCA; Uncharacterized protein
STRINGAquca_100_00022.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.21e-51bHLH family protein