PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe5G339000.2.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

TCP

Protein Properties

Length: 332aa MW: 38289.8 Da PI: 10.0929

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe5G339000.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	42.3	2.8e-13	34	107	5	74
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....ssssasece 74 k+++ k + ++R R++ + fF L +LG+ + ++ti WLl+q++p ++e g+ +++++ce Aqcoe5G339000.2.p 34 KKKNAKQRRSEKVFGKRTRVPYHSRSTFFRLNIKLGHQTEGETIAWLLKQSEPVVDEVLGNknqiWRKPKTKCE 107 556666666777889*********************************************96666455555662 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	2.0E-10	48	109	IPR005333	Transcription factor, TCP
Pfam	PF11926	2.4E-59	106	312	IPR024593	Domain of unknown function DUF3444

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence Send to blast
MSNMIGVSKS TQEIISKNNN SQANKKFQVQ QPLKKKNAKQ RRSEKVFGKR TRVPYHSRST 60 FFRLNIKLGH QTEGETIAWL LKQSEPVVDE VLGNKNQIWR KPKTKCEQTN TTFNDLDGFN 120 VKKYFELNQV WALWHDVDGM PRSYARIHQV LPAELKVEVA LLEPQPMTNE ETQWLVEKNL 180 PVACGAFKET KLTTTTEVSA FSHQVNCQRP SRKRSYYKIF PRKGEIWAVF KDWDISWTLH 240 DLMSDTQYEM VEVVSDFCEK SGIFVIGLTR LGEHGDVFER QLHEGHVLSK QFSRKEMLRF 300 SHRVPASKVT GEGIPTGSWK LNSAALPHQL L*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5C4A1	0.0	A0A2G5C4A1_AQUCA; Uncharacterized protein
STRING	Aquca_100_00034.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	1e-09	TCP family protein

Link Out ? help Back to Top
Phytozome	Aqcoe5G339000.2.p