PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe4G268900.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | bHLH | ||||||||
Protein Properties | Length: 448aa MW: 49914.2 Da PI: 5.2869 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.2 | 1.9e-05 | 336 | 373 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L Aqcoe4G268900.1.p 336 RKEKLGDRITALQQLVSPF-----GKTDTASVLFEAIEYIKFL 373 677888999*******998.....8****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.668 | 324 | 373 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.13E-6 | 334 | 377 | No hit | No description |
SuperFamily | SSF47459 | 3.14E-10 | 334 | 383 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 0.0038 | 335 | 379 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 9.9E-8 | 338 | 377 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042631 | Biological Process | cellular response to water deprivation | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus | ||||
GO:0071472 | Biological Process | cellular response to salt stress | ||||
GO:2000214 | Biological Process | regulation of proline metabolic process | ||||
GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 448 aa Download sequence Send to blast |
MADEFQIGIS NGNWWSSSAR NTSTPCSTTL SSEVGNYGWS QEMEMKARSC EDSCNSMVYQ 60 DTTTQRPQES DSSTLQMMGY SLSSPIMDWN QALLNRSSTR SSELNLSNML QEEVISSSSF 120 QQQSGMDSSH AQKDWSPRNY SDGGEESSIS SFKQINPVFG LDSSKNSGDC IVTCQGLHMN 180 YPIISTSTTL LPGLFEPDLQ SQQSPYCMMN NYSSPMNYHM DLNELSPSFP QFNKTSSQKP 240 QSNTTNQLHF SNNTHFWNPS ADTMSDVRSS YSVSPQSQFL TSTTIKEKRN CSNMSAGKMN 300 DEEVRDTSSV AKKTSEPTFK RPRIETPSPL PTFKVRKEKL GDRITALQQL VSPFGKTDTA 360 SVLFEAIEYI KFLHEQVGQV LSTPYMKNGA PATQYQQKSD KSKDTEALKQ IDLRSRGLCL 420 VPISSTFPVT NETTADFWTP TFGGSYR* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010267864.1 | 1e-168 | PREDICTED: transcription factor bHLH112-like | ||||
TrEMBL | A0A2G5D4K2 | 0.0 | A0A2G5D4K2_AQUCA; Uncharacterized protein | ||||
STRING | Aquca_028_00271.1 | 0.0 | (Aquilegia coerulea) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61660.1 | 1e-64 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe4G268900.1.p |