PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G242400.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family GeBP
Protein Properties Length: 314aa    MW: 35280.2 Da    PI: 6.3361
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G242400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57371.81.3e-22115214397
             DUF573   3 fqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk..aksgkepsfskehdqkif 89 
                        f + ws+eDe+vlLqG+++fk++++    +++   d+++e +k+s+sf ++++ql +K+r+L +K++   +k  + +g++   +k+h+++ +
  Aqcoe4G242400.1.p 115 FGKKWSKEDELVLLQGMVNFKKTNNGgliDSKPKYDKLVESIKDSLSFAYTNKQLQNKVRSLGDKYEIVAHKvmSGNGENLFENKPHEEQLY 206
                        5677****************7766444678889**********************************999996556777888899******* PP

             DUF573  90 elskkiWg 97 
                        +lsk+ W+
  Aqcoe4G242400.1.p 207 NLSKIYWE 214
                        *******7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045049.8E-20116213IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MVVQSPSSSS SSYEDDDDNN QESDEEVEKK TPNSKQDSDD DDDDDDSDDE QQDSEKNRYK  60
VSANVSDNVN LNKRKSRKSV TNKSIIVALN ADKRSKTITT GSGSVSGSNN KLNPFGKKWS  120
KEDELVLLQG MVNFKKTNNG GLIDSKPKYD KLVESIKDSL SFAYTNKQLQ NKVRSLGDKY  180
EIVAHKVMSG NGENLFENKP HEEQLYNLSK IYWEDVKIIQ QKSSSRKKIK KSNENSELPY  240
YYLEQLCTVS NSSLNSLMKA NAEKGWEDSI GKANAVKLNQ KAKDLMIAEV EIHLKRCQLI  300
KDTTKLLLGG LKE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5E4S60.0A0A2G5E4S6_AQUCA; Uncharacterized protein
STRINGAquca_012_00175.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01370.13e-12DNA-binding storekeeper protein-related transcriptional regulator