PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G192600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family GeBP
Protein Properties Length: 332aa    MW: 37786.3 Da    PI: 4.6236
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G192600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57363.64.9e-20152243397
             DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 
                        f +lws++DeivlL++++d+ +     + +d + + + +k+s+sf+++ +ql +K+ ++ kK++k +  + + k  +f+++hd k++++ k 
  Aqcoe4G192600.1.p 152 FVKLWSNKDEIVLLKAMVDYGKL---TSASDYEIILKSIKNSLSFDYTIKQLKNKVDNFAKKYRKLEYGQPKAKGLKFKEPHDAKVYQFLKT 240
                        889*****************444...5577*************************************9999******************998 PP

             DUF573  95 iWg 97 
                         +g
  Aqcoe4G192600.1.p 241 YYG 243
                        775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045045.5E-17152241IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MTSPSSSSCS SYEDDTVITE PGKIVVQQNL ANQEVTQNLE DGKEDDDSSS SEGEEEEDSG  60
DDDDEEEEGE REKHTNQKND VEEKEEEEQE SDEEEEEVQE KNEVSKDEVF STPAGSNSKK  120
RSFNRRDDIV DAKDQQPNTK PKTIGSDSKN WFVKLWSNKD EIVLLKAMVD YGKLTSASDY  180
EIILKSIKNS LSFDYTIKQL KNKVDNFAKK YRKLEYGQPK AKGLKFKEPH DAKVYQFLKT  240
YYGGEEKEQN EGDQPSEAIK VVHRRSSRNK NKLNANSRSS GLVSVIVDKG RAEDNLEQKR  300
KDLMIAEAEV HSRHLQLISE IGRLMLKASR R*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5CJD80.0A0A2G5CJD8_AQUCA; Uncharacterized protein
STRINGAquca_050_00036.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.12e-11DNA-binding storekeeper protein-related transcriptional regulator