PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe4G189100.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

GeBP

Protein Properties

Length: 379aa MW: 41804.6 Da PI: 5.3092

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe4G189100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	79.5	5.2e-25	150	247	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkak.sgkepsfskehdqkifel 91 klfqr++se+Dei lL Gl++fk+k ++ + +++y+f+k+s+++ +s +q+++K+rrL kK+ k+ k++k g +p++s++h+ k++ l Aqcoe4G189100.1.p 150 KLFQRIFSEKDEIDLLNGLLEFKKKGNQITNSVSSELYDFLKGSVNVGASLTQISDKVRRLNKKYLKNAKRTKpGGGDPTISNPHELKSYLL 241 579*****************7777666667889*******************************9652689*********** PP DUF573 92 skkiWg 97 sk+iW Aqcoe4G189100.1.p 242 SKQIWS 247 ***6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	6.6E-25	152	247	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence Send to blast
MAPKRPSPSD QPPSSVSTSE DEEIEGTEGE ESEESESEKT TKPIQSSGDV AEEEEEENDE 60 SGSDSGSDSD NEPVKHMVAS VKPISSKPIV HTPKSTIKKP TSTSISISTS TSTSSAAMKR 120 PLETDTNDKD SKKKKKIADI EERKSGEEKK LFQRIFSEKD EIDLLNGLLE FKKKGNQITN 180 SVSSELYDFL KGSVNVGASL TQISDKVRRL NKKYLKNAKR TKPGGGDPTI SNPHELKSYL 240 LSKQIWSDQI LKDAQENKSG GVTAGKKSKS KLKSNGFLAV SPKVVDLMEE DNIIGSQYQY 300 LDQSLKPQNR LSLPMPPADF GEITAKDGWD KLGSSKAQAF DQRWKALIIK EAEVYLERVE 360 LVQEQTKWML DMHKSSDS*

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence Send to blast

MAPKRPSPSD QPPSSVSTSE DEEIEGTEGE ESEESESEKT TKPIQSSGDV AEEEEEENDE  60
SGSDSGSDSD NEPVKHMVAS VKPISSKPIV HTPKSTIKKP TSTSISISTS TSTSSAAMKR  120
PLETDTNDKD SKKKKKIADI EERKSGEEKK LFQRIFSEKD EIDLLNGLLE FKKKGNQITN  180
SVSSELYDFL KGSVNVGASL TQISDKVRRL NKKYLKNAKR TKPGGGDPTI SNPHELKSYL  240
LSKQIWSDQI LKDAQENKSG GVTAGKKSKS KLKSNGFLAV SPKVVDLMEE DNIIGSQYQY  300
LDQSLKPQNR LSLPMPPADF GEITAKDGWD KLGSSKAQAF DQRWKALIIK EAEVYLERVE  360
LVQEQTKWML DMHKSSDS*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5CJB8	0.0	A0A2G5CJB8_AQUCA; Uncharacterized protein
STRING	Aquca_050_00017.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G11510.1	9e-16	DNA-binding storekeeper protein-related transcriptional regulator

Link Out ? help Back to Top
Phytozome	Aqcoe4G189100.1.p