PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G184500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family GeBP
Protein Properties Length: 333aa    MW: 37954.7 Da    PI: 6.9468
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G184500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57372.29.6e-23126226397
             DUF573   3 fqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk..aksgkepsf.skehdqki 88 
                        f + ws++De+vlLqG+++fk++ +    +++   +++ e +k+s+sf ++++ql +K+r+L++K+++ v+k  +  g+e+ f +k+h+++ 
  Aqcoe4G184500.1.p 126 FGKKWSNDDELVLLQGMVNFKKTYDGgliDSTPKYEKLLESIKNSLSFAYTNKQLQNKVRSLRDKYETVVHKlmSGGGDENLFeNKPHEEQL 217
                        6778****************8765444578889***************************************864445555552689***** PP

             DUF573  89 felskkiWg 97 
                        ++lsk+ W+
  Aqcoe4G184500.1.p 218 YNLSKIYWE 226
                        ********7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.2E-19127225IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MAQSPSSSSS YEDDDDNNIH TSNEESDVQV EKKSTTNNSE EEQDVVVAVK AKKKTNQEEK  60
EDDDEEEDNN SKKKNRYKVV STNVNSSKRK LVKDVDALVN YKKQKNEDSI IVCLSADKQP  120
KTPNTFGKKW SNDDELVLLQ GMVNFKKTYD GGLIDSTPKY EKLLESIKNS LSFAYTNKQL  180
QNKVRSLRDK YETVVHKLMS GGGDENLFEN KPHEEQLYNL SKIYWEDMKI IRHKSSKKKN  240
KKSNETPELP YYYLEQLCTI NNGSLNSFPI TPPLGLVAIS VEKGWEESIG KANAVKLNQK  300
AKDLMIAEVE VYLKRCQLMK DTTKMLLDGL KQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17189KKKNRYKVVSTNVNSSKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5E4S61e-112A0A2G5E4S6_AQUCA; Uncharacterized protein
STRINGAquca_012_00175.11e-113(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01370.15e-15DNA-binding storekeeper protein-related transcriptional regulator