PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aqcoe4G131000.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
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Family | CPP | ||||||||
Protein Properties | Length: 76aa MW: 8696.3 Da PI: 4.7909 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 27.4 | 6.7e-09 | 23 | 46 | 18 | 41 |
TCR 18 CeCfaagkkCseeCkCedCkNkee 41 C Cfa gk+C+e C C++C+N+ + Aqcoe4G131000.1.p 23 CGCFAVGKYCAEPCACQECFNNPQ 46 *********************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03638 | 4.9E-6 | 22 | 44 | IPR005172 | CRC domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 76 aa Download sequence Send to blast |
MFFFLPIYFH LEKGFYFLLW LICGCFAVGK YCAEPCACQE CFNNPQYEDK VLQARIVNWG 60 LIQLELGISF SVIGV* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04850.1 | 2e-12 | Tesmin/TSO1-like CXC domain-containing protein |
Link Out ? help Back to Top | |
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Phytozome | Aqcoe4G131000.1.p |