PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G128700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family G2-like
Protein Properties Length: 472aa    MW: 52784.4 Da    PI: 7.108
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G128700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like74.31.7e-2381134155
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        k r++Wt++LHe+F++a+++L    +A+Pk+il lmkv gL++++++SHLQkYRl
  Aqcoe4G128700.1.p  81 KRRVVWTTQLHEKFLQALSKL-SMARAVPKRILALMKVRGLSRANIASHLQKYRL 134
                        689******************.9*******************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466893.23E-1779138IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.4E-2380138IPR009057Homeodomain-like
TIGRFAMsTIGR015578.8E-2381135IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 472 aa     Download sequence    Send to blast
MQGPPPPPPP PPTPQNRLNS LSINDNICRQ GKSSSSSSNT SNGKKRRQDN NNNQKRPYKK  60
RGKEDQDFGK KTAVVPVPLK KRRVVWTTQL HEKFLQALSK LSMARAVPKR ILALMKVRGL  120
SRANIASHLQ KYRLYQNKYK GTPESDYPRR RIRMRLPDET EYHEDSPSHD HSMWYDSFNY  180
QNQKQCPLPA NQPGLPDNFL PPNNFNHVPS AHPQYNFQEG SNDNFMAQAS YGHPTAVTNQ  240
EYLGRPWMSG EPTMNQSNVS AYLGSSGTSA PLYGNDLNIG STINTTASYA EQQVTQGNAG  300
FHPNAPLDSN FGNLSFESLQ NFPPSADIGN MVPFGPWNGI LTGTMAGEIP NNDNSADISG  360
MDEIRKGKKP IEEVDDEYSL LDDSLYFSEM NFDLSSHGEP FVVNPNYDVV GESSTKALVN  420
PNKLQQGNEV NNSGCFNSVN DIEDYLLNQG YKNSNEACVI LKHQFNFYDY M*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A2e-1580138462ARR10-B
5lxu_A2e-1583135355Transcription factor LUX
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DAW40.0A0A2G5DAW4_AQUCA; Uncharacterized protein
STRINGAquca_024_00004.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01760.11e-15response regulator 14