PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G417700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family GeBP
Protein Properties Length: 336aa    MW: 38226.9 Da    PI: 7.419
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G417700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57384.51.5e-2664158297
             DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 
                        +f+r+w+e+Dei +LqGl+d  +++g     d++ fy+ ++ ++s  ++ksql+eK+rrL+kKf+  ++++ +g + s+ ++hd+  f +sk
  Aqcoe3G417700.1.p  64 KFHRIWTESDEIRFLQGLLDS-TSQGLIFPRDLHLFYNRFSTCMSQPYTKSQLSEKLRRLRKKFRVISSRILNGLDASLLSDHDKALFSISK 154
                        699*****************9.778999999************************************************************* PP

             DUF573  94 kiWg 97 
                        k+W+
  Aqcoe3G417700.1.p 155 KLWD 158
                        ***8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.1E-2765158IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MSSISIKTAA RKLPIKRKSP ELSLNPNPNF IPKLESQHFN EESEEEQEQE QETLLYEIKP  60
PPFKFHRIWT ESDEIRFLQG LLDSTSQGLI FPRDLHLFYN RFSTCMSQPY TKSQLSEKLR  120
RLRKKFRVIS SRILNGLDAS LLSDHDKALF SISKKLWDSN GSIQSPFNVN NTTNSNSANK  180
KKSNASVTVK VSFNPTFTPS ISPSLLIPSS AQENHHHHHH HRNDEDEDNV ACKVEIDDKG  240
VNFDGGNGEE LNLVNDNGDG TRRIVAKTVM DVFDKSLKEV KMSLADQSSS SSLNGFSHQG  300
KWDDLMKRCR EQSLAELDML GRRMRLVLED SIRDQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010274734.11e-82PREDICTED: probable transcription factor At5g28040
TrEMBLA0A2G5F7I60.0A0A2G5F7I6_AQUCA; Uncharacterized protein
STRINGAquca_002_01294.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.25e-18DNA-binding storekeeper protein-related transcriptional regulator