PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G290600.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 196aa    MW: 21160.7 Da    PI: 4.427
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G290600.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.14.6e-182169355
                AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                       +kGVr  k++g+Wv+eIr p     +  r++lg+++t+e+Aa+a++aa  +l+g
  Aqcoe3G290600.2.p 21 FKGVRM-KTWGKWVSEIRKPQ----SkERIWLGSYDTPEKAARAYDAALYCLRG 69
                       89**96.55**********83....35*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.7E-272077IPR001471AP2/ERF domain
PROSITE profilePS5103220.4682077IPR001471AP2/ERF domain
CDDcd000185.24E-272076No hitNo description
SMARTSM003801.0E-292083IPR001471AP2/ERF domain
PRINTSPR003672.0E-82132IPR001471AP2/ERF domain
PfamPF008473.5E-112169IPR001471AP2/ERF domain
SuperFamilySSF541712.22E-192178IPR016177DNA-binding domain
PRINTSPR003672.0E-84359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    Send to blast
MGSAKKPRMG GLKQGQAAGN FKGVRMKTWG KWVSEIRKPQ SKERIWLGSY DTPEKAARAY  60
DAALYCLRGS QGKFNFLDDE RPEIPSSFQD PLSISEIKAI AARFASSECM SILSSTSPVT  120
AMNPPEVVNT DVEKESTFDV DSLSGAVDVD SLSGAGVSGP STLSSESFLL DELITFESDS  180
IWALLEETEN LSAYI*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-15976371Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026403649.12e-45ethylene-responsive transcription factor ERF015-like
TrEMBLA0A2G5F1Y21e-133A0A2G5F1Y2_AQUCA; Uncharacterized protein
STRINGAquca_002_00165.11e-134(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.19e-37ERF family protein